RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SDSLQ96GA7 329 aa14.57□□□□□ -0.08
HDAC4-211ENST00000494800 ZNF488Q96MN9 340 aa14.57□□□□□ -0.08
HDAC4-211ENST00000494800 TBX15Q96SF7 602 aa14.57□□□□□ -0.08
HDAC4-211ENST00000494800 SIRPDQ9H106 197 aa14.57□□□□□ -0.08
HDAC4-211ENST00000494800 ZNF222Q9UK12 451 aa14.57□□□□□ -0.08
HDAC4-211ENST00000494800 TRBV23-1A0A0A0MS06 115 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 A0A1W2PPH5 198 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 RFPL4AA6NLU0 287 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 TMEM212A6NML5 194 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 RFPL4AL1F8VTS6 287 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 FCN3O75636 299 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 SELLP14151 372 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 PRTN3P24158 256 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 PRDX2P32119 198 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 IL18R1Q13478 541 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 FIP1L1Q6UN15 594 aaKnown RBP14.56□□□□□ -0.08
HDAC4-211ENST00000494800 C12orf54Q6X4T0 127 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 UTS2BQ765I0 119 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 CALHM1Q8IU99 346 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 Q8IYB0 196 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 FGFRL1Q8N441 504 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 ZNRF1Q8ND25 227 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 LHX4Q969G2 390 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 RNF166Q96A37 237 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-211ENST00000494800 SPSB1Q96BD6 273 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 FGGYQ96C11 551 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 CEP19Q96LK0 163 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 ESM1Q9NQ30 184 aa14.56□□□□□ -0.08
HDAC4-211ENST00000494800 IGHV1-69DA0A0B4J2H0 117 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 CENPVL3A0A0U1RRI6 287 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 DNAJC9-AS1A6NH13 148 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 OR4C45A6NMZ5 311 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 KNG1P01042 644 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 IGHV1-69P01742 117 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 MYL12AP19105 171 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 DCKP27707 260 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 MTCP1P56278 107 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 GUCA2AQ02747 115 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 TUSC1Q2TAM9 212 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 TMPRSS11AQ6ZMR5 421 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 LHFPL2Q6ZUX7 228 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 VMO1Q7Z5L0 202 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 MKXQ8IYA7 352 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 OR5AK2Q8NH90 309 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 ADAT3Q96EY9 351 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-211ENST00000494800 ZNF48Q96MX3 618 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-211ENST00000494800 JAM3Q9BX67 310 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 ISG20L2Q9H9L3 353 aaKnown RBP14.55□□□□□ -0.08
HDAC4-211ENST00000494800 HES4Q9HCC6 221 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 FGF20Q9NP95 211 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-211ENST00000494800 NOX4Q9NPH5 578 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 CHCHD3Q9NX63 227 aaKnown RBP14.55□□□□□ -0.08
HDAC4-211ENST00000494800 OR14J1Q9UGF5 321 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 MAB21L2Q9Y586 359 aa14.55□□□□□ -0.08
HDAC4-211ENST00000494800 DOCK11Q5JSL3 2073 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 CLDN34H7C241 214 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 M0R1W7 72 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 WBP4O75554 376 aaKnown RBP14.54□□□□□ -0.08
HDAC4-211ENST00000494800 CLIC3O95833 236 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 TFF1P04155 84 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 ATF1P18846 271 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 EEF1B2P24534 225 aaKnown RBP14.54□□□□□ -0.08
HDAC4-211ENST00000494800 AZGP1P25311 298 aaKnown RBP14.54□□□□□ -0.08
HDAC4-211ENST00000494800 SMN1Q16637 294 aaKnown RBP14.54□□□□□ -0.08
HDAC4-211ENST00000494800 C1orf122Q6ZSJ8 110 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 SLC25A26Q70HW3 274 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 CNIH3Q8TBE1 160 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 TBC1D15Q8TC07 691 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 OPALINQ96PE5 141 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 DCLRE1BQ9H816 532 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 CAB39Q9Y376 341 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-211ENST00000494800 HSPE1-MOB4S4R3N1 261 aa14.54□□□□□ -0.08
HDAC4-211ENST00000494800 TRBV2A0A0J9YWF9 115 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 ANKRD65E5RJM6 399 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 H0YAE9 185 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 HAX1O00165 279 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 ERVK11-1P61568 191 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 DEFB112Q30KQ8 113 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 OGFRL1Q5TC84 451 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-211ENST00000494800 RUSC1-AS1Q66K80 236 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 NCR3LG1Q68D85 454 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 C8orf59Q8N0T1 100 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-211ENST00000494800 FAM185AQ8N0U4 392 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 BATF2Q8N1L9 274 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 CD177Q8N6Q3 437 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 OR5D14Q8NGL3 314 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 TSEN15Q8WW01 171 aaKnown RBP14.53□□□□□ -0.08
HDAC4-211ENST00000494800 SLAMF9Q96A28 289 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 CPNE2Q96FN4 548 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-211ENST00000494800 FAM234AQ9H0X4 552 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 METTL8Q9H825 291 aaKnown RBP14.53□□□□□ -0.08
HDAC4-211ENST00000494800 GLS2Q9UI32 602 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 DHDHQ9UQ10 334 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 EXOSC1Q9Y3B2 195 aaKnown RBP14.53□□□□□ -0.08
HDAC4-211ENST00000494800 FAM96BQ9Y3D0 163 aa14.53□□□□□ -0.08
HDAC4-211ENST00000494800 IGKV1-27A0A075B6S5 117 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 hCG_1809904A0A1W2PP81 198 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 A0A1W2PPE2 198 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 A0A1W2PR64 198 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 A0A1W2PRV1 198 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms