RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ODF4Q2M2E3 257 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 SPATS1Q496A3 300 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 SLC35D3Q5M8T2 416 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 LCN1P1Q5VSP4 162 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 FOXB2Q5VYV0 432 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 TMEM236Q5W0B7 351 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 CRIP3Q6Q6R5 217 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 CCDC121Q6ZUS5 278 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 TRAPPC6BQ86SZ2 158 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 DYNAPQ8N1N2 210 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 AJUBAQ96IF1 538 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 FAM206AQ9NX38 181 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 TVP23BQ9NYZ1 205 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 SLC22A13Q9Y226 551 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 ARL2BPQ9Y2Y0 163 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 TBL2Q9Y4P3 447 aaKnown RBP7.78□□□□□ -1.16
UBR4-216ENST00000494503 KIAA2026Q5HYC2 2103 aa7.78□□□□□ -1.16
UBR4-216ENST00000494503 DNAJC8O75937 253 aaPredicted RBP7.77□□□□□ -1.17
UBR4-216ENST00000494503 PGA5P0DJD9 388 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 ZNF728P0DKX0 622 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 ATP6V1B1P15313 513 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 JUNBP17275 347 aaPredicted RBP7.77□□□□□ -1.17
UBR4-216ENST00000494503 ALOX5APP20292 161 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 GABRR1P24046 479 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 SNU13P55769 128 aaKnown RBP7.77□□□□□ -1.17
UBR4-216ENST00000494503 ACTA2P62736 377 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 BLCAPP62952 87 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 GNGT1P63211 74 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 ACTG2P63267 376 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 ACTC1P68032 377 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 ACTA1P68133 377 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 CLVS2Q5SYC1 327 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 LCN8Q6JVE9 175 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 CCBE1Q6UXH8 406 aaPredicted RBP7.77□□□□□ -1.17
UBR4-216ENST00000494503 CD300LDQ6UXZ3 194 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 PLEKHG7Q6ZR37 379 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 TRPM8Q7Z2W7 1104 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 CENPVQ7Z7K6 275 aaPredicted RBP7.77□□□□□ -1.17
UBR4-216ENST00000494503 ANGPTL5Q86XS5 388 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 HS3ST5Q8IZT8 346 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 ZNF676Q8N7Q3 588 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 PIFOQ8TCI5 191 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 MALSU1Q96EH3 234 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 ZNF714Q96N38 554 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 CNN2Q99439 309 aaKnown RBP7.77□□□□□ -1.17
UBR4-216ENST00000494503 CHID1Q9BWS9 393 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 YIPF3Q9GZM5 350 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 MUC13Q9H3R2 512 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 SLC7A11Q9UPY5 501 aa7.77□□□□□ -1.17
UBR4-216ENST00000494503 TCRBV4S1A1TA0A5B7 111 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 MEGF11A6BM72 1044 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 A6NDX4 124 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 ACOD1A6NK06 481 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 VGLL3A8MV65 326 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 RPP14O95059 124 aaKnown RBP7.76□□□□□ -1.17
UBR4-216ENST00000494503 CLIC3O95833 236 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 IGHV1-8P0DP01 117 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 OSMP13725 252 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 PRKACGP22612 351 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 CXCR4P61073 352 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 SLC35A2P78381 396 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 TRIM25Q14258 630 aaKnown RBP7.76□□□□□ -1.17
UBR4-216ENST00000494503 C9orf152Q5JTZ5 239 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 VAX1Q5SQQ9 334 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 Q6ZS46 218 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 ZNF679Q8IYX0 411 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 TPRX1Q8N7U7 411 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 BCAS4Q8TDM0 211 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 ASB17Q8WXJ9 295 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 EMG1Q92979 244 aaKnown RBP7.76□□□□□ -1.17
UBR4-216ENST00000494503 STMN2Q93045 179 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 SLAMF9Q96A28 289 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 OR8B4Q96RC9 309 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 APOL4Q9BPW4 351 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 NRIP2Q9BQI9 281 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 CHST6Q9GZX3 395 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 H2AFY2Q9P0M6 372 aaPredicted RBP7.76□□□□□ -1.17
UBR4-216ENST00000494503 NUFIP1Q9UHK0 495 aaKnown RBP7.76□□□□□ -1.17
UBR4-216ENST00000494503 COPS3Q9UNS2 423 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 TMEM14AQ9Y6G1 99 aa7.76□□□□□ -1.17
UBR4-216ENST00000494503 hADV38S2A0JD32 116 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 PQLC2LA1A4F0 135 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 FAM172BPA6NC97 362 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 C17orf98A8MV24 154 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 PRR32B1ATL7 298 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 K7N7A8 449 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 MAGEB4O15481 346 aaPredicted RBP7.75□□□□□ -1.17
UBR4-216ENST00000494503 ZNF254O75437 659 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 TTRP02766 147 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 CHRM2P08172 466 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 CD24P25063 80 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 ARHGDIBP52566 201 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 GYS2P54840 703 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 ACTR3P61158 418 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 MS4A2Q01362 244 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 IL18R1Q13478 541 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 GRK1Q15835 563 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 ZNF626Q68DY1 528 aa7.75□□□□□ -1.17
UBR4-216ENST00000494503 C11orf87Q6NUJ2 197 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms