RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 FCGR2AP12318 317 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 LIFP15018 202 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 SRD5A2P31213 254 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
RFC4-214ENST00000494047 RBP2P50120 134 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 DVL1P1P54792 670 aaPredicted RBP10.05□□□□□ -0.8
RFC4-214ENST00000494047 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
RFC4-214ENST00000494047 PCOLCEQ15113 449 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 IAH1Q2TAA2 248 aaPredicted RBP10.05□□□□□ -0.8
RFC4-214ENST00000494047 DHRS11Q6UWP2 260 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 UNQ6126/PRO20091Q6UXV3 157 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 Q6ZS49 121 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 C20orf196Q8IYI0 205 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 WDSUB1Q8N9V3 476 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 THAP3Q8WTV1 239 aaPredicted RBP10.05□□□□□ -0.8
RFC4-214ENST00000494047 BORCS8Q96FH0 119 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 CCDC74BQ96LY2 380 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 C1QTNF6Q9BXI9 259 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 BCO1Q9HAY6 547 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 TREM1Q9NP99 234 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 ZNF701Q9NV72 531 aaPredicted RBP10.05□□□□□ -0.8
RFC4-214ENST00000494047 PLEK2Q9NYT0 353 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 LUZP4Q9P127 313 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 PADI1Q9ULC6 663 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 PIGLQ9Y2B2 252 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 TMED3Q9Y3Q3 217 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 UNC13CQ8NB66 2214 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 PHF3Q92576 2039 aaKnown RBP10.05□□□□□ -0.8
RFC4-214ENST00000494047 PCNX3Q9H6A9 2034 aa10.05□□□□□ -0.8
RFC4-214ENST00000494047 IGHV1-45A0A0A0MS14 117 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 A0A1W2PNR3 127 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 BTBD17A6NE02 478 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 SGCEO43556 437 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 RAD51DO75771 328 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 LIPCP11150 499 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 FOLR2P14207 255 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 RPS2P15880 293 aaKnown RBP10.04□□□□□ -0.8
RFC4-214ENST00000494047 SERPINA2P20848 420 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 DUSP1P28562 367 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 S100GP29377 79 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
RFC4-214ENST00000494047 SFTPDP35247 375 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 P2RY1P47900 373 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 FUT6P51993 359 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 RAB32Q13637 225 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 ENDOGQ14249 297 aaKnown RBP10.04□□□□□ -0.8
RFC4-214ENST00000494047 SLC9A3R2Q15599 337 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 FAM76BQ5HYJ3 339 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 RAET1LQ5VY80 246 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 CARD17Q5XLA6 110 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 DHRS13Q6UX07 377 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 SHISA6Q6ZSJ9 500 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 LGI3Q8N145 548 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 AGBL5Q8NDL9 886 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 TMED6Q8WW62 240 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 NABP1Q96AH0 204 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 NRIP2Q9BQI9 281 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 ST6GALNAC5Q9BVH7 336 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 BANF2Q9H503 90 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 RHOFQ9HBH0 211 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 COQ3Q9NZJ6 369 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 DKK4Q9UBT3 224 aa10.04□□□□□ -0.8
RFC4-214ENST00000494047 PQLC2LA1A4F0 135 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 LRP5LA4QPB2 252 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 FBXO24O75426 580 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 FARS2O95363 451 aaKnown RBP10.03□□□□□ -0.8
RFC4-214ENST00000494047 WISP1O95388 367 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 CDS2O95674 445 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 GLAP06280 429 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 CTXN2P0C2S0 81 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 FAM157CP0CG43 387 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 ZNF728P0DKX0 622 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 MMP9P14780 707 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 SPINK2P20155 84 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 CRYGSP22914 178 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 CDAP32320 146 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 RFC3P40938 356 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 MTCP1P56278 107 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 S100A10P60903 97 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 RBM39Q14498 530 aaKnown RBP10.03□□□□□ -0.8
RFC4-214ENST00000494047 ZNF266Q14584 549 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 PEA15Q15121 130 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 HFEQ30201 348 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 ANKRD55Q3KP44 614 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 BEX5Q5H9J7 111 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 TMEM268Q5VZI3 342 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 OTPQ5XKR4 325 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 TMEM42Q69YG0 159 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 TMEM211Q6ICI0 200 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 RPUSD3Q6P087 351 aaKnown RBP10.03□□□□□ -0.8
RFC4-214ENST00000494047 LINC00596Q86U02 117 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 SAXO1Q8IYX7 474 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 C15orf54Q8N8G6 183 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 CMSS1Q9BQ75 279 aaKnown RBP10.03□□□□□ -0.8
RFC4-214ENST00000494047 TCEAL7Q9BRU2 100 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 ZNF2Q9BSG1 426 aaPredicted RBP10.03□□□□□ -0.8
RFC4-214ENST00000494047 NAA60Q9H7X0 242 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms