RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ASB9Q96DX5 294 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 NSL1Q96IY1 281 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 CITED2Q99967 270 aaPredicted RBP14.02□□□□□ -0.17
COL9A1-210ENST00000493682 TTTY10Q9BZA0 68 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 HES4Q9HCC6 221 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 GPR173Q9NS66 373 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 OR14J1Q9UGF5 321 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 COPS3Q9UNS2 423 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 TBL2Q9Y4P3 447 aaKnown RBP14.02□□□□□ -0.17
COL9A1-210ENST00000493682 CCDC182A6NF36 153 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 ODF3BA8MYP8 253 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 PRKACGP22612 351 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 RIDAP52758 137 aaKnown RBP14.01□□□□□ -0.17
COL9A1-210ENST00000493682 GNGT1P63211 74 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 SSX2Q16385 188 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 CLVS2Q5SYC1 327 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 LCN1P1Q5VSP4 162 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 ASRGL1Q7L266 308 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 OR4F17Q8NGA8 305 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 ASB17Q8WXJ9 295 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 CCDC124Q96CT7 223 aaKnown RBP14.01□□□□□ -0.17
COL9A1-210ENST00000493682 MALSU1Q96EH3 234 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 OR4F4Q96R69 305 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 PRSS22Q9GZN4 317 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 WNT10AQ9GZT5 417 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 SLC25A19Q9HC21 320 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 ABCB10Q9NRK6 738 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 AURKAIP1Q9NWT8 199 aaPredicted RBP14.01□□□□□ -0.17
COL9A1-210ENST00000493682 IKZF2Q9UKS7 526 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 TMEM14AQ9Y6G1 99 aa14.01□□□□□ -0.17
COL9A1-210ENST00000493682 K7N7A8 449 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 DLGAP1O14490 977 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 E2F6O75461 281 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 SRSF10O75494 262 aaKnown RBP14□□□□□ -0.17
COL9A1-210ENST00000493682 MPZP25189 248 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 GYS2P54840 703 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 ESRRGP62508 458 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 SNAPC1Q16533 368 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF626Q68DY1 528 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 ANGPTL5Q86XS5 388 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 OR11H6Q8NGC7 330 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 OR13D1Q8NGV5 346 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 CANT1Q8WVQ1 401 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 PHF21AQ96BD5 680 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 OR5M11Q96RB7 305 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 TEX12Q9BXU0 123 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 TVP23BQ9NYZ1 205 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 PITPNC1Q9UKF7 332 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 GTF2A1LQ9UNN4 478 aa14□□□□□ -0.17
COL9A1-210ENST00000493682 MEX3AA1L020 520 aaKnown RBP13.99□□□□□ -0.17
COL9A1-210ENST00000493682 A6NIN4 97 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 PEX14O75381 377 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 RBP4P02753 201 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF728P0DKX0 622 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 ANXA8P13928 327 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 ERVK11-1P61568 191 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 COL10A1Q03692 680 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 Q6ZS46 218 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 ASCC1Q8N9N2 400 aaKnown RBP13.99□□□□□ -0.17
COL9A1-210ENST00000493682 SLC22A13Q9Y226 551 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 V9GYS6 101 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 NOTCH3Q9UM47 2321 aa13.99□□□□□ -0.17
COL9A1-210ENST00000493682 A0A1B0GTI1 187 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 LOC110117498-PIK3R3F6TDL0 507 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 MAGEB4O15481 346 aaPredicted RBP13.98□□□□□ -0.17
COL9A1-210ENST00000493682 ATP8B1O43520 1251 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF737O75373 536 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 IGHV1-8P0DP01 117 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 JUNBP17275 347 aaPredicted RBP13.98□□□□□ -0.17
COL9A1-210ENST00000493682 DYNLT3P51808 116 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 BLCAPP62952 87 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 DYNC1I2Q13409 638 aaKnown RBP13.98□□□□□ -0.17
COL9A1-210ENST00000493682 BCL2L15Q5TBC7 163 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 ELMOD2Q8IZ81 293 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 OR14K1Q8NGZ2 314 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 CNN2Q99439 309 aaKnown RBP13.98□□□□□ -0.17
COL9A1-210ENST00000493682 APOL4Q9BPW4 351 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 MOB1AQ9H8S9 216 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 OR52A1Q9UKL2 312 aa13.98□□□□□ -0.17
COL9A1-210ENST00000493682 T-ENOLP0DO92 83 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 CALB2P22676 271 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 EDDM3BP56851 147 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 OR12D2P58182 307 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 IL24Q13007 206 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 TMEM95Q3KNT9 176 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 ARSJQ5FYB0 599 aaPredicted RBP13.97□□□□□ -0.17
COL9A1-210ENST00000493682 FOXB2Q5VYV0 432 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF322Q6U7Q0 402 aaPredicted RBP13.97□□□□□ -0.17
COL9A1-210ENST00000493682 PLEKHG7Q6ZR37 379 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 Q6ZSR3 168 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 GDPD3Q7L5L3 318 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 TCF23Q7RTU1 214 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 PKIBQ9C010 78 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL9A1-210ENST00000493682 HILPDAQ9Y5L2 63 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 R4GMQ9 66 aa13.97□□□□□ -0.17
COL9A1-210ENST00000493682 DNAH3Q8TD57 4116 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 FAM230AA0A1W2PPH8 454 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 AQP12BA6NM10 295 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 DHRS7CA6NNS2 312 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms