RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 LIPFP07098 398 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CD99P14209 185 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 LMO1P25800 156 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SLC6A8P48029 635 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 TAS2R50P59544 299 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CCL20P78556 96 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SRSF4Q08170 494 aaKnown RBP6.07□□□□□ -1.44
VPS13B-205ENST00000493587 IER5LQ5T953 404 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CD300LDQ6UXZ3 194 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 Q6ZNB5 142 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 TCTEX1D1Q8N7M0 179 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 OR5AU1Q8NGC0 362 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 OR51A2Q8NGJ7 313 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 IL17FQ96PD4 163 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CD180Q99467 661 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SIGMAR1Q99720 223 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 PARLQ9H300 379 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CXorf36Q9H7Y0 433 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CDH20Q9HBT6 801 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 IL26Q9NPH9 171 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 MBNL1Q9NR56 388 aaKnown RBP6.07□□□□□ -1.44
VPS13B-205ENST00000493587 FRRS1LQ9P0K9 344 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 CGGBP1Q9UFW8 167 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-205ENST00000493587 IKZF2Q9UKS7 526 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 SPACA6W5XKT8 324 aa6.07□□□□□ -1.44
VPS13B-205ENST00000493587 PIN1P1O15428 100 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 PDE6DO43924 150 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CDS2O95674 445 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 OMGP23515 440 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CDKN1AP38936 164 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 FRKP42685 505 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 TAS2R31P59538 309 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF85Q03923 595 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 EXOSC7Q15024 291 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ZXDCQ2QGD7 858 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF260Q3ZCT1 412 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 PARS2Q7L3T8 475 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM170AQ8WVE7 144 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 IGSF8Q969P0 613 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 GPR146Q96CH1 333 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 DERL1Q9BUN8 251 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 OR52D1Q9H346 318 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 WASHC3Q9Y3C0 194 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 LRP12Q9Y561 859 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 TRAPPC1Q9Y5R8 145 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 TRBV6-7A0A0A0MS04 114 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 DCDC2BA2VCK2 349 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 GRIFINA4D1Z8 144 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 OR2T8A6NH00 312 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 SEC11BP0C7V7 166 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 FAHP16930 419 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 SERPINA4P29622 427 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 TIA1P31483 386 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 FAM3BP58499 235 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 PLP1P60201 277 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 TCEA2Q15560 299 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 HNRNPA1L2Q32P51 320 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF658BQ4V348 819 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ATOH7Q8N100 152 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 RFLNBQ8N5W9 214 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 OR2AJ1Q8NGZ0 328 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CACNG8Q8WXS5 425 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ARHGDIGQ99819 225 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 LRFN3Q9BTN0 628 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 BOCQ9BWV1 1114 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ELL3Q9HB65 397 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 SLC45A2Q9UMX9 530 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 RFNGQ9Y644 331 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 PRSS21Q9Y6M0 314 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CDC14CA4D256 554 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 GAGE10A6NGK3 116 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 FAM166BA8MTA8 275 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 KNG1P01042 644 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 GAPDHP04406 335 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 PRPH2P23942 346 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 GABRA3P34903 492 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 RBMXP38159 391 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CDKN2AP42771 156 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CSNK2A1P68400 391 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF684Q5T5D7 378 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 C16orf82Q7Z2V1 217 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 MRPL21Q7Z2W9 205 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 SIGLECL1Q8N7X8 197 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 MORN4Q8NDC4 146 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CSNK2A3Q8NEV1 391 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 PSMF1Q92530 271 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 DPF1Q92782 380 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 LINC00615Q96LM1 132 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ADOQ96SZ5 270 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 CTDSP1Q9GZU7 261 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 SMDT1Q9H4I9 107 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 MTHFD2LQ9H903 347 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 RXFP3Q9NSD7 469 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 THYN1Q9P016 225 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 P2RX2Q9UBL9 471 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 ST6GALNAC2Q9UJ37 374 aa6.06□□□□□ -1.44
VPS13B-205ENST00000493587 MRPS28Q9Y2Q9 187 aaKnown RBP6.06□□□□□ -1.44
VPS13B-205ENST00000493587 F5H5T6 163 aa6.05□□□□□ -1.44
VPS13B-205ENST00000493587 SLC31A1O15431 190 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms