RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ABHD12BQ7Z5M8 362 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 THNSL2Q86YJ6 484 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM123Q8N131 208 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 SLC35G3Q8N808 338 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 BAHD1Q8TBE0 780 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 SLAMF6Q96DU3 332 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 FAM71F1Q96KD3 344 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 CABLES2Q9BTV7 478 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 NXF5Q9H1B4 397 aaKnown RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 SLC7A11Q9UPY5 501 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 GOLT1BQ9Y3E0 138 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 FAM221BA6H8Z2 402 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 CLDN34H7C241 214 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 ST8SIA3O43173 380 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 KLF8O95600 359 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 IFI6P09912 130 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 OGFOD3Q6PK18 319 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 METTL27Q8N6F8 245 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 OR14C36Q8NHC7 312 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 RNF133Q8WVZ7 376 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 H0Y8X5 98 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 IFNL4K9M1U5 179 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 M0R143 59 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 CXCL10P02778 98 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 HSPB1P04792 205 aaKnown RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 CTSDP07339 412 aaPredicted RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 CD55P08174 381 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 RUNX1Q01196 453 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 GPM6BQ13491 265 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 PHLDA2Q53GA4 152 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 WDR25Q64LD2 544 aaPredicted RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 C6orf201Q7Z4U5 140 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 FBXL14Q8N1E6 418 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 OR1P1Q8NH06 330 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 OR1E3Q8WZA6 343 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 PRTFDC1Q9NRG1 225 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 MCTS1Q9ULC4 181 aaKnown RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 CLDN16Q9Y5I7 305 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 MYO7BQ6PIF6 2116 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 SLC33A1O00400 549 aaPredicted RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 PLPP3O14495 311 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 DFFBO76075 338 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 AKT2P31751 481 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 LBX1P52954 281 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 RRADP55042 308 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 FXYD4P59646 89 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 PAX5Q02548 391 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 TEX38Q6PEX7 206 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 SUMF1Q8NBK3 374 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 OR10S1Q8NGN2 331 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 SNIP1Q8TAD8 396 aaKnown RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM171Q8WVE6 324 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 HIST1H2AAQ96QV6 131 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 PECRQ9BY49 303 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 MED29Q9NX70 200 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF319Q9P2F9 582 aa10.25□□□□□ -0.77
HDAC4-210ENST00000493582 THAP10Q9P2Z0 257 aaPredicted RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 NXT1Q9UKK6 140 aaKnown RBP10.25□□□□□ -0.77
HDAC4-210ENST00000493582 CCDC163A0A0D9SF12 145 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 XKRY2A2RUG3 117 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 DXOO77932 396 aaKnown RBP10.24□□□□□ -0.77
HDAC4-210ENST00000493582 ONECUT2O95948 504 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 THEGLP0DJG4 465 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 CSNK1A1P48729 337 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 TDGF1P3P51864 188 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 H3F3AP84243 136 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM187Q14656 261 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 P2RY6Q15077 328 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 CLEC12BQ2HXU8 276 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 CLDND2Q8NHS1 167 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 STT3BQ8TCJ2 826 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 RTN4IP1Q8WWV3 396 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM106CQ9BVX2 250 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 HRASLS2Q9NWW9 162 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 FAM230AA0A1W2PPH8 454 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF17P17021 662 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 ALDH3B1P43353 468 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 PPM1FP49593 454 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-210ENST00000493582 FUT7Q11130 342 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 C2orf27AQ580R0 203 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 ABLIM2Q6H8Q1 611 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 OR5L1Q8NGL2 311 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 OR2AJ1Q8NGZ0 328 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 PHF3Q92576 2039 aaKnown RBP10.24□□□□□ -0.77
HDAC4-210ENST00000493582 BOD1Q96IK1 185 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 SYT3Q9BQG1 590 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 TWSG1Q9GZX9 223 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 ELL3Q9HB65 397 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-210ENST00000493582 CDH20Q9HBT6 801 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 DKKL1Q9UK85 242 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 GAB2Q9UQC2 676 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 DLEU1O43261 78 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 EDN3P14138 238 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 RND2P52198 227 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 FOXF1Q12946 379 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 IL13RA2Q14627 380 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms