RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 RANBP3Q9H6Z4 567 aaPredicted RBP12.06□□□□□ -0.48
PTPN7-216ENST00000492977 ST3GAL6Q9Y274 331 aa12.06□□□□□ -0.48
PTPN7-216ENST00000492977 TP53TG5Q9Y2B4 290 aa12.06□□□□□ -0.48
PTPN7-216ENST00000492977 FAM215AQ9Y5M1 114 aa12.06□□□□□ -0.48
PTPN7-216ENST00000492977 CUL9Q8IWT3 2517 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A10PA6NDY2 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A18PA6NE21 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A16PA6NEW6 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A20PA6NIJ5 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A7PA6NKC0 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 OR5B21A6NL26 309 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A22PA8MWA6 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A12PA8MX19 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A5PA8MXJ8 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A23PA8MXZ1 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 ZNF732B4DXR9 585 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FABP7O15540 132 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 SMPD2O60906 423 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 PMP2P02689 132 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 SFTPBP07988 381 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A15PP0C7V4 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A13PP0C7W8 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A14PP0C7W9 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM90A24PP0C7X0 464 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 AMY2BP19961 511 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 TUBG1P23258 451 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 CHATP28329 748 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 PMELP40967 661 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 RBM11P57052 281 aaKnown RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 TAS2R46P59540 309 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 TSC22D1Q15714 1073 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 MICBQ29980 383 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 ATPAF1Q5TC12 328 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 UNQ6126/PRO20091Q6UXV3 157 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 MYPOPQ86VE0 399 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 MKXQ8IYA7 352 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FAM169BQ8N8A8 192 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 EMG1Q92979 244 aaKnown RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 HYLS1Q96M11 299 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 ZNF436Q9C0F3 470 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 FGF23Q9GZV9 251 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 OPN3Q9H1Y3 402 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 CRIM1Q9NZV1 1036 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 LUZP4Q9P127 313 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 PAIP2BQ9ULR5 123 aaKnown RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 GEMIN2O14893 280 aaKnown RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 RAC2P15153 192 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 SELEP16581 610 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 HAAOP46952 286 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 SNU13P55769 128 aaKnown RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 UCP2P55851 309 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 GNG3P63215 75 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 PIGYQ3MUY2 71 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 NKAPLQ5M9Q1 402 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 BHLHA15Q7RTS1 189 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 OR5H2Q8NGV7 314 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 ZNF431Q8TF32 576 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 ST6GALNAC5Q9BVH7 336 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 CHST6Q9GZX3 395 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 OR51B6Q9H340 312 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 ZNF629Q9UEG4 869 aaPredicted RBP12.05□□□□□ -0.48
PTPN7-216ENST00000492977 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 AMDHD2Q9Y303 409 aa12.05□□□□□ -0.48
PTPN7-216ENST00000492977 INTS1Q8N201 2190 aaKnown RBP12.04□□□□□ -0.48
PTPN7-216ENST00000492977 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 SVILO95425 2214 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 TPD52L2O43399 206 aaKnown RBP12.04□□□□□ -0.48
PTPN7-216ENST00000492977 OR4E1P0C645 316 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 ZNF16P17020 682 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-216ENST00000492977 DTYMKP23919 212 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-216ENST00000492977 OR3A3P47888 321 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 NHLRC3Q5JS37 347 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 FAHD2BQ6P2I3 314 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-216ENST00000492977 TMEM17Q86X19 198 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 ZNF573Q86YE8 665 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 OR10AD1Q8NGE0 317 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 OR5AP2Q8NGF4 316 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 OR52B4Q8NGK2 314 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 TERB2Q8NHR7 220 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 ZFAND1Q8TCF1 268 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 CAPSLQ8WWF8 208 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 EXTL1Q92935 676 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 FAHD2AQ96GK7 314 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 FAAP24Q9BTP7 215 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 SFXN3Q9BWM7 321 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 OR2J1Q9GZK6 312 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 DLL4Q9NR61 685 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 LOC400499M0QZD8 3231 aa12.04□□□□□ -0.48
PTPN7-216ENST00000492977 ZFHX4Q86UP3 3567 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 APC2O95996 2303 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 OR5H1A6NKK0 313 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 OR2AT4A6NND4 320 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms