RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PDZK1IP1Q13113 114 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 IKZF1Q13422 519 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 GPR50Q13585 617 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 KISS1Q15726 138 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 STUMQ69YW2 141 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 MS4A15Q8N5U1 240 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 OR51A2Q8NGJ7 313 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 OR5D18Q8NGL1 313 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 ANGPTL6Q8NI99 470 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 CPNE2Q96FN4 548 aaPredicted RBP11.63□□□□□ -0.55
CCM2-217ENST00000492883 MED30Q96HR3 178 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 OR14A2Q96R54 314 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 GPER1Q99527 375 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 TMED9Q9BVK6 235 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 DNTTIP1Q9H147 329 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 C7orf69Q9H7B7 122 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 MTCH1Q9NZJ7 389 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 LPAR3Q9UBY5 353 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 POLR3KQ9Y2Y1 108 aaPredicted RBP11.63□□□□□ -0.55
CCM2-217ENST00000492883 VPS13CQ709C8 3753 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 RFPL4AA6NLU0 287 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 ZNF879B4DU55 563 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 RFPL4AL1F8VTS6 287 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 J3QLI3 93 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 ANGPTL7O43827 346 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 MRPS14O60783 128 aaKnown RBP11.62□□□□□ -0.55
CCM2-217ENST00000492883 TFF1P04155 84 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 TMEM225BP0DP42 221 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 AMY2BP19961 511 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 PRDX2P32119 198 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 TGFBR2P37173 567 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 ERVK11-1P61568 191 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 IL13RA1P78552 427 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 CD276Q5ZPR3 534 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 BTNL3Q6UXE8 466 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 ZNF788Q6ZQV5 615 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 IL17RELQ6ZVW7 336 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 SVOPQ8N4V2 548 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 FAM216BQ8N7L0 139 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 RAB40AQ8WXH6 277 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 ST8SIA4Q92187 359 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 THRSPQ92748 146 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 ORAI1Q96D31 301 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 MGLLQ99685 303 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 SMURF1Q9HCE7 757 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 ISYNA1Q9NPH2 558 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 TMEM138Q9NPI0 162 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 OR14J1Q9UGF5 321 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 LRRC42Q9Y546 428 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 MED13LQ71F56 2210 aa11.62□□□□□ -0.55
CCM2-217ENST00000492883 CR1P17927 2039 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 IGKV1D-17A0A075B6S4 117 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 A0A1B0GW55 424 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 F8VVB4 439 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 F8VWA3 439 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 ALDOBP05062 364 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4L2P0CJ85 424 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4L3P0CJ86 424 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4L4P0CJ87 422 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4L5P0CJ88 424 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4L6P0CJ89 424 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4L7P0CJ90 424 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 BCL3P20749 454 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 MAPK3P27361 379 aaPredicted RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 BDKRB2P30411 391 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 SRP14P37108 136 aaKnown RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 EMX1Q04741 257 aaPredicted RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 MLLT11Q13015 90 aaPredicted RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 TBCEQ15813 527 aaPredicted RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 ACSM3Q53FZ2 586 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 ASPHD2Q6ICH7 369 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 ZNF529Q6P280 563 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4L9Q6RFH8 374 aaPredicted RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 FIP1L1Q6UN15 594 aaKnown RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 RNF144BQ7Z419 303 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 Q8IYB0 196 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 OR52N4Q8NGI2 321 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 EMG1Q92979 244 aaKnown RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 TMEM203Q969S6 136 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 GAFA1Q96PS6 74 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 NUDT16L1Q9BRJ7 211 aaKnown RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 MRI1Q9BV20 369 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 HES4Q9HCC6 221 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 ACOT13Q9NPJ3 140 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 DUX4Q9UBX2 424 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 INSIG2Q9Y5U4 225 aa11.61□□□□□ -0.55
CCM2-217ENST00000492883 ZNF469Q96JG9 3925 aaPredicted RBP11.61□□□□□ -0.55
CCM2-217ENST00000492883 TANC2Q9HCD6 1990 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 TRBV5-7A0A0A0MS05 114 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 IGHV2-70DA0A0C4DH43 119 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 KIR2DS1A0A191URI9 304 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 GPR37O15354 613 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 SIGLEC5O15389 551 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 ENSAO43768 121 aaKnown RBP11.6□□□□□ -0.55
CCM2-217ENST00000492883 ECDO95905 644 aaPredicted RBP11.6□□□□□ -0.55
CCM2-217ENST00000492883 KNG1P01042 644 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 NDUFB7P17568 137 aa11.6□□□□□ -0.55
CCM2-217ENST00000492883 IGFBP3P17936 291 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms