RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PLCXD2Q0VAA5 305 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 ZP4Q12836 540 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 GAMTQ14353 236 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 DMRTC1Q5HYR2 192 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 GFI1BQ5VTD9 330 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 OR8B12Q8NGG6 310 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 OR5D18Q8NGL1 313 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF721Q8TF20 911 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 TSLPQ969D9 159 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 CPNE4Q96A23 557 aaPredicted RBP16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 SIT1Q9Y3P8 196 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 TLCD2A6NGC4 264 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF587BE7ETH6 402 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 RPL36A-HNRNPH2H7BZ11 118 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 SOD3P08294 240 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 DMRTC2Q8IXT2 367 aaPredicted RBP16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 HIST3H2BBQ8N257 126 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 LMX1AQ8TE12 382 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 PADI1Q9ULC6 663 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 ZDHHC8Q9ULC8 765 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 PI4KAP42356 2102 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 A0A087WWC5 75 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 SERPINE3A8MV23 424 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 DDAH2O95865 285 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 HEXBP07686 556 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 ANOS1P23352 680 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 DDTP30046 118 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 UBE2KP61086 200 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 NHLH2Q02577 135 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 UBE2V2Q15819 145 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 KHDC3LQ587J8 217 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 PDZD11Q5EBL8 140 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 DNLZQ5SXM8 178 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 H1FNTQ75WM6 255 aaPredicted RBP16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 C1QL2Q7Z5L3 287 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 SNIP1Q8TAD8 396 aaKnown RBP16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 SSC4DQ8WTU2 575 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 UNKLQ9H9P5 680 aaKnown RBP16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 LANCL2Q9NS86 450 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF319Q9P2F9 582 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 URGCP-MRPS24S4R325 110 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 IGKV1-9A0A0C4DH69 117 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 RBFOX3A6NFN3 312 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 C19orf67A6NJJ6 358 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 DHRS7CA6NNS2 312 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 SLC31A2O15432 143 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 ERVFRD-1P60508 538 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 CCL20P78556 96 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF124Q15973 351 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 STX12Q86Y82 276 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 EMC6Q9BV81 110 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 KCNIP3Q9Y2W7 256 aa16.94■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF726A6NNF4 738 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 CXCL12P48061 93 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF121P58317 390 aaPredicted RBP16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 PKIAP61925 76 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 DEFB133Q30KQ1 61 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 SP6Q3SY56 376 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 HLA-DQA1Q5Y7H0 255 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 C9orf40Q8IXQ3 194 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 MAFAQ8NHW3 353 aaPredicted RBP16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 HS3ST3B1Q9Y662 390 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 LHFPL6Q9Y693 200 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 CACNA1EQ15878 2313 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 ELOA3CA0A087WX78 387 aaPredicted RBP16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 NSG1A0A0A6YYJ2 146 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 ARGFXA6NJG6 315 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 HSD17B6O14756 317 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 RRP8O43159 456 aaKnown RBP16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 KLK2P20151 261 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 NKX6-1P78426 367 aaPredicted RBP16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 UNQ6494/PRO21346Q6UXR6 183 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 STT3BQ8TCJ2 826 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 POLR1DQ9Y2S0 133 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 CFAP54Q96N23 3096 aa16.93■□□□□ 0.3
SNAPC3-206ENST00000490969 UNC13CQ8NB66 2214 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 TGIF2-C20orf24A0A0A6YYL0 155 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 TMEM150CB9EJG8 249 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 GIMD1P0DJR0 217 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 MYF5P13349 255 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 CEBPGP53567 150 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 BIDP55957 195 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 PIGPP57054 158 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 DCAF7P61962 342 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 TLE3Q04726 772 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 CCDC54Q8NEL0 328 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 CADM4Q8NFZ8 388 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 DECR2Q9NUI1 292 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 MCTS1Q9ULC4 181 aaKnown RBP16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 RCL1Q9Y2P8 373 aaKnown RBP16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 RP1P56715 2156 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 TECTAO75443 2155 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 NPIPB13A6NJU9 1138 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 NPIPB4C9JG80 1138 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 H0YL77 283 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 IFNA10P01566 189 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 NDUFB7P17568 137 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 TAS2R60P59551 318 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 DLK1P80370 383 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 TMEM187Q14656 261 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms