RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	WNT4	P56705	351 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	DGUOK	Q16854	277 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	CRIP3	Q6Q6R5	217 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	UTS2B	Q765I0	119 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	OR51A2	Q8NGJ7	313 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	RAB40A	Q8WXH6	277 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	DACT3	Q96B18	629 aa	Predicted RBP	15.4	■□□□□ 0.06
C4A-256	ENST00000490663	C10orf35	Q96D05	121 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	SMIM19	Q96E16	107 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	ZCCHC4	Q9H5U6	513 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	MTCH1	Q9NZJ7	389 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	ZNF222	Q9UK12	451 aa		15.4	■□□□□ 0.06
C4A-256	ENST00000490663	ANGPTL7	O43827	346 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	HCK	P08631	526 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	OCM2	P0CE71	109 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	OCM	P0CE72	109 aa	Predicted RBP	15.39	■□□□□ 0.05
C4A-256	ENST00000490663	HSPA13	P48723	471 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	ATP1B3	P54709	279 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	CCDC58	Q4VC31	144 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	DMKN	Q6E0U4	476 aa	Predicted RBP	15.39	■□□□□ 0.05
C4A-256	ENST00000490663	ZNF788	Q6ZQV5	615 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	BTN2A1	Q7KYR7	527 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	CD177	Q8N6Q3	437 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	NANOGP1	Q8N7R0	232 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	ZNRF1	Q8ND25	227 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	C22orf15	Q8WYQ4	148 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	H1FX	Q92522	213 aa	Known RBP	15.39	■□□□□ 0.05
C4A-256	ENST00000490663	GHSR	Q92847	366 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	PGLYRP3	Q96LB9	341 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	OR5M11	Q96RB7	305 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	NRIP2	Q9BQI9	281 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	PKIB	Q9C010	78 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	SCN3B	Q9NY72	215 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	KAAG1	Q9UBP8	84 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	POLDIP2	Q9Y2S7	368 aa		15.39	■□□□□ 0.05
C4A-256	ENST00000490663	RFPL4A	A6NLU0	287 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	RFPL4AL1	F8VTS6	287 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663		J3QLI3	93 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	NDUFA2	O43678	99 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	BCL3	P20749	454 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	NPBWR2	P48146	333 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	RBP2	P50120	134 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	MTCP1	P56278	107 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	SLC35A2	P78381	396 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	IL24	Q13007	206 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	SMIM21	Q3B7S5	101 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	SLC36A1	Q7Z2H8	476 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	C1QL2	Q7Z5L3	287 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	EGFL6	Q8IUX8	553 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	TMEM185A	Q8NFB2	350 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	GPR148	Q8TDV2	347 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	C12orf43	Q96C57	262 aa	Known RBP	15.38	■□□□□ 0.05
C4A-256	ENST00000490663	MRI1	Q9BV20	369 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	RBFOX1	Q9NWB1	397 aa	Known RBP	15.38	■□□□□ 0.05
C4A-256	ENST00000490663	ZNF281	Q9Y2X9	895 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	MAB21L2	Q9Y586	359 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	AUP1	Q9Y679	476 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	ATR	Q13535	2644 aa		15.38	■□□□□ 0.05
C4A-256	ENST00000490663	PPIAL4C	A0A0B4J2A2	164 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663		A0A1W2PPK0	400 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	NDUFB3	O43676	98 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	SULT1B1	O43704	296 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	SFTPB	P07988	381 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	CEL	P19835	753 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	PRKACB	P22694	351 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	GATA3	P23771	443 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	NPY4R	P50391	375 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	FGF12	P61328	243 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	ERVK11-1	P61568	191 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	RPS11	P62280	158 aa	Known RBP eCLIP	15.37	■□□□□ 0.05
C4A-256	ENST00000490663	IL13RA1	P78552	427 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	PRB3	Q04118	309 aa	Predicted RBP	15.37	■□□□□ 0.05
C4A-256	ENST00000490663	ARMCX4	Q5H9R4	360 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	KLF17	Q5JT82	389 aa	Predicted RBP	15.37	■□□□□ 0.05
C4A-256	ENST00000490663	BTNL3	Q6UXE8	466 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	LHFPL2	Q6ZUX7	228 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	PARP16	Q8N5Y8	322 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	HAVCR2	Q8TDQ0	301 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	EMG1	Q92979	244 aa	Known RBP	15.37	■□□□□ 0.05
C4A-256	ENST00000490663	MYDGF	Q969H8	173 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	TMEM106A	Q96A25	262 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	CEP19	Q96LK0	163 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	CCDC90B	Q9GZT6	254 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	NEK6	Q9HC98	313 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	HES4	Q9HCC6	221 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	RAB26	Q9ULW5	256 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	ERGIC3	Q9Y282	383 aa		15.37	■□□□□ 0.05
C4A-256	ENST00000490663	LSM2	Q9Y333	95 aa	Known RBP	15.37	■□□□□ 0.05
C4A-256	ENST00000490663	SOX21	Q9Y651	276 aa	Predicted RBP	15.37	■□□□□ 0.05
C4A-256	ENST00000490663	FBN1	P35555	2871 aa	Known RBP	15.36	■□□□□ 0.05
C4A-256	ENST00000490663	TRAV40	A0A0B4J280	105 aa		15.36	■□□□□ 0.05
C4A-256	ENST00000490663	IGKV1-12	A0A0C4DH73	117 aa		15.36	■□□□□ 0.05
C4A-256	ENST00000490663	KIR2DS1	A0A191URI9	304 aa		15.36	■□□□□ 0.05
C4A-256	ENST00000490663	SIGLEC5	O15389	551 aa		15.36	■□□□□ 0.05
C4A-256	ENST00000490663	ENSA	O43768	121 aa	Known RBP	15.36	■□□□□ 0.05
C4A-256	ENST00000490663	NOS1AP	O75052	506 aa	Predicted RBP	15.36	■□□□□ 0.05
C4A-256	ENST00000490663	FSHB	P01225	129 aa		15.36	■□□□□ 0.05
C4A-256	ENST00000490663	IGKV1D-12	P01611	117 aa		15.36	■□□□□ 0.05
C4A-256	ENST00000490663	ACAA1	P09110	424 aa	Predicted RBP	15.36	■□□□□ 0.05
C4A-256	ENST00000490663	IGHV4-38-2	P0DP08	117 aa		15.36	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms