RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 SCGNO76038 276 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 ECDO95905 644 aaPredicted RBP13.36□□□□□ -0.27
PCCB-218ENST00000490504 ALDH3B1P43353 468 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 SRP9P49458 86 aaKnown RBP13.36□□□□□ -0.27
PCCB-218ENST00000490504 AP3S2P59780 193 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 DYRK1AQ13627 763 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 KLF9Q13886 244 aaPredicted RBP13.36□□□□□ -0.27
PCCB-218ENST00000490504 TBC1D28Q2M2D7 210 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 MRPL21Q7Z2W9 205 aaKnown RBP13.36□□□□□ -0.27
PCCB-218ENST00000490504 CADM3Q8N126 398 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 MAPK1IP1LQ8NDC0 245 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 DUSP18Q8NEJ0 188 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 KCNG3Q8TAE7 436 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 C1orf147Q96MC9 270 aaPredicted RBP13.36□□□□□ -0.27
PCCB-218ENST00000490504 TECTBQ96PL2 329 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 REPIN1Q9BWE0 567 aaKnown RBP13.36□□□□□ -0.27
PCCB-218ENST00000490504 GHRLQ9UBU3 117 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 NAV3Q8IVL0 2385 aa13.36□□□□□ -0.27
PCCB-218ENST00000490504 NRASP01111 189 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 GSTT2BP0CG30 244 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 FAM157BP0CG42 384 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 ZNF14P17017 642 aaPredicted RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 PTGFRP43088 359 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 PRSS12P56730 875 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 GK2Q14410 553 aaPredicted RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 CRIP3Q6Q6R5 217 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 UBASH3BQ8TF42 649 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 PPP1R14BQ96C90 147 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 GAL3ST1Q99999 423 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 MMP28Q9H239 520 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 PTTG3PQ9NZH4 202 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 STARD10Q9Y365 291 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 NSD1Q96L73 2696 aaPredicted RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 FN1P02751 2386 aaKnown RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 IGLV1-44P01699 117 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 CELA3BP08861 270 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 CECR9P0C854 216 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 NAT2P11245 290 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 PTHLHP12272 177 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 APOBEC3AP31941 199 aaPredicted RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 PRSS3P35030 304 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 WNT5AP41221 380 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 FAM189A2Q15884 450 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 PLET1Q6UQ28 207 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 LHFPL2Q6ZUX7 228 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 MYPOPQ86VE0 399 aaPredicted RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 TNFAIP8L1Q8WVP5 186 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 NUDT16L1Q9BRJ7 211 aaKnown RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 REG4Q9BYZ8 158 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 BARX1Q9HBU1 254 aaPredicted RBP13.35□□□□□ -0.27
PCCB-218ENST00000490504 SLC7A11Q9UPY5 501 aa13.35□□□□□ -0.27
PCCB-218ENST00000490504 TLN2Q9Y4G6 2542 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 MEIOCA2RUB1 952 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 H7C417 338 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 J3QW42 95 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 SULT1C2O00338 296 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 CDC14BO60729 498 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 NGFP01138 241 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 CBR1P16152 277 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 SLC6A1P30531 599 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 CALCRP30988 508 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 NAAAQ02083 359 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 MST1LQ2TV78 715 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 KRTAP21-3Q3LHN1 58 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 DMRTC1Q5HYR2 192 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 CSNK2A3Q8NEV1 391 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 OR56B2PQ8NGI1 322 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 S100A13Q99584 98 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 CST11Q9H112 138 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 SCPEP1Q9HB40 452 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 NLKQ9UBE8 527 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 KLK11Q9UBX7 282 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 MTFP1Q9UDX5 166 aa13.34□□□□□ -0.27
PCCB-218ENST00000490504 ANKRD20A5PA0PJZ0 165 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 RAB27BO00194 218 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 CRTAPO75718 401 aaPredicted RBP13.33□□□□□ -0.28
PCCB-218ENST00000490504 RBBP9O75884 186 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 MPIG6BO95866 241 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 IGKV3-15P01624 115 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 CRYAAP02489 173 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 CHRM2P08172 466 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 BTCP35070 178 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 RBP2P50120 134 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 IDH3GP51553 393 aaPredicted RBP13.33□□□□□ -0.28
PCCB-218ENST00000490504 FUT6P51993 359 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 MTCP1P56278 107 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 SSBP1Q04837 148 aaKnown RBP13.33□□□□□ -0.28
PCCB-218ENST00000490504 KRTAP1-1Q07627 177 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 SWI5Q1ZZU3 235 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 C3orf36Q3SXR2 165 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 MOGAT2Q3SYC2 334 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 PLCXD3Q63HM9 321 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 MOB3CQ70IA8 216 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 OR5D18Q8NGL1 313 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 PIGCQ92535 297 aa13.33□□□□□ -0.28
PCCB-218ENST00000490504 BORCS8Q96FH0 119 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms