RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ZNF229Q9UJW7 825 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 SVILO95425 2214 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 KIF27Q86VH2 1401 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 A0A0J9YYE9 177 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 ANKRD20A5PA0PJZ0 165 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 SEC14L6B5MCN3 397 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 C4orf51C9J302 202 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 C9JQL5 133 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 H0YC42 278 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 KDELR3O43731 214 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 ALOX12BO75342 701 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 CXorf1O96002 111 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 TRBC1P01850 177 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 STAG3L2P0CL84 134 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 NUDT2P50583 147 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 STK38Q15208 465 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 TOMM34Q15785 309 aaPredicted RBP1.87□□□□□ -2.11
CD46-216ENST00000490278 LINC00303Q3SY05 128 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 KCTD16Q68DU8 428 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 C16orf87Q6PH81 154 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 FAM231DQ6ZW35 169 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 FA2HQ7L5A8 372 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 SETD3Q86TU7 594 aaPredicted RBP1.87□□□□□ -2.11
CD46-216ENST00000490278 ZDHHC22Q8N966 263 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 OR4K2Q8NGD2 314 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 OR4A15Q8NGL6 344 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 ITLN2Q8WWU7 325 aaPredicted RBP1.87□□□□□ -2.11
CD46-216ENST00000490278 SPACA5Q96QH8 159 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 GAL3ST2Q9H3Q3 398 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 ABCB9Q9NP78 766 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 RAB23Q9ULC3 237 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 THADAQ6YHU6 1953 aa1.87□□□□□ -2.11
CD46-216ENST00000490278 LOXHD1Q8IVV2 1947 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 UPK1AO00322 258 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 RNF113AO15541 343 aaKnown RBP1.86□□□□□ -2.11
CD46-216ENST00000490278 GMDSO60547 372 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 OTCP00480 354 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 IGHG2P01859 326 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 RHOCP08134 193 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 GZMAP12544 262 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 HRES1P13985 223 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 CPN2P22792 545 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 TEAD1P28347 426 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 ARR3P36575 388 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 ACOT2P49753 483 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 IL5RAQ01344 420 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 MEF2BQ02080 365 aaPredicted RBP1.86□□□□□ -2.11
CD46-216ENST00000490278 IHHQ14623 411 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 ELOCQ15369 112 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 TAL2Q16559 108 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 NDUFAF6Q330K2 333 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 DEFB134Q4QY38 66 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 SYT6Q5T7P8 510 aaPredicted RBP1.86□□□□□ -2.11
CD46-216ENST00000490278 CYP4Z2PQ8N1L4 340 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 CA13Q8N1Q1 262 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 ZFP62Q8NB50 900 aaPredicted RBP1.86□□□□□ -2.11
CD46-216ENST00000490278 OR4C13Q8NGP0 309 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 OR5H2Q8NGV7 314 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 OR8K3Q8NH51 312 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 RBPMSQ93062 196 aaKnown RBP1.86□□□□□ -2.11
CD46-216ENST00000490278 SMIM8Q96KF7 97 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 METTL26Q96S19 204 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 VSIRQ9H7M9 311 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 RBM22Q9NW64 420 aaKnown RBP eCLIP1.86□□□□□ -2.11
CD46-216ENST00000490278 AP3M1Q9Y2T2 418 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 KLF13Q9Y2Y9 288 aaPredicted RBP1.86□□□□□ -2.11
CD46-216ENST00000490278 V9GYY9 64 aa1.86□□□□□ -2.11
CD46-216ENST00000490278 TRAV8-7A0A075B6U6 113 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 KIR2DS1A0A191URI9 304 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 M0R1B8 84 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 TCAPO15273 167 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 OR2A4O95047 310 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 IGKV1D-16P01601 117 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 CDK1P06493 297 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 SLC6A1P30531 599 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 FMODQ06828 376 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 IDNKQ5T6J7 187 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 USP50Q70EL3 339 aaPredicted RBP1.85□□□□□ -2.11
CD46-216ENST00000490278 PRNTQ86SH4 94 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 NELFCDQ8IXH7 590 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 LINC00337Q8N6G1 96 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 CCNYL1Q8N7R7 359 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 ZNF555Q8NEP9 628 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 PPP1R36Q96LQ0 422 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 RILPQ96NA2 401 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 OR2M4Q96R27 311 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 OR2V2Q96R30 315 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 OR2A7Q96R45 310 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 THTPAQ9BU02 230 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 PLA2G12AQ9BZM1 189 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 WDR55Q9H6Y2 383 aaPredicted RBP1.85□□□□□ -2.11
CD46-216ENST00000490278 PARP11Q9NR21 331 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 TMEM38BQ9NVV0 291 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 DDIT4Q9NX09 232 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 ZNF230Q9UIE0 474 aaPredicted RBP1.85□□□□□ -2.11
CD46-216ENST00000490278 CARHSP1Q9Y2V2 147 aaKnown RBP1.85□□□□□ -2.11
CD46-216ENST00000490278 CHTOPQ9Y3Y2 248 aaKnown RBP1.85□□□□□ -2.11
CD46-216ENST00000490278 INSIG2Q9Y5U4 225 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 R4GN34 69 aa1.85□□□□□ -2.11
CD46-216ENST00000490278 MROH5Q6ZUA9 1318 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms