RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 V9GYQ6 96 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 ACOD1A6NK06 481 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 RIIAD1A6NNX1 92 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 CCDC22O60826 627 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 ZNF737O75373 536 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 ZFPL1O95159 310 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 GASTP01350 101 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 HSD17B1P14061 328 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 ZNF3P17036 446 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 JUNBP17275 347 aaPredicted RBP6.53□□□□□ -1.36
USP39-216ENST00000490193 MPZP25189 248 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 CALRP27797 417 aaKnown RBP6.53□□□□□ -1.36
USP39-216ENST00000490193 SLC6A1P30531 599 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 CEBPDP49716 269 aaPredicted RBP6.53□□□□□ -1.36
USP39-216ENST00000490193 MEF2CQ06413 473 aaPredicted RBP6.53□□□□□ -1.36
USP39-216ENST00000490193 SLC34A1Q06495 639 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 SF3A3Q12874 501 aaKnown RBP eCLIP6.53□□□□□ -1.36
USP39-216ENST00000490193 IL18R1Q13478 541 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 SAMD4BQ5PRF9 694 aaKnown RBP6.53□□□□□ -1.36
USP39-216ENST00000490193 TCF23Q7RTU1 214 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 RNF144BQ7Z419 303 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 PIGWQ7Z7B1 504 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 MRPL41Q8IXM3 137 aaKnown RBP6.53□□□□□ -1.36
USP39-216ENST00000490193 FAM81AQ8TBF8 368 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 ZNF488Q96MN9 340 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 DGCR6LQ9BY27 220 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 ARMC1Q9NVT9 282 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 POLDIP2Q9Y2S7 368 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 HILPDAQ9Y5L2 63 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
USP39-216ENST00000490193 IGHV2-26A0A0B4J1V2 119 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 FAM183AA6NL82 134 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 H0YHG0 523 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 TNFRSF11BO00300 401 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 NXPH2O95156 264 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 AMY1AP04745 511 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 AMY2AP04746 511 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 PIPP12273 146 aaPredicted RBP6.52□□□□□ -1.37
USP39-216ENST00000490193 MAGEA2P43356 314 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 THBS3P49746 956 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ERVK11-1P61568 191 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ACTA2P62736 377 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ACTG2P63267 376 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ACTC1P68032 377 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ACTA1P68133 377 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 TNP2Q05952 138 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 RIPPLY1Q0D2K3 151 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 DYNC1I2Q13409 638 aaKnown RBP6.52□□□□□ -1.37
USP39-216ENST00000490193 PLCXD3Q63HM9 321 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 TMEM42Q69YG0 159 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 DEGS2Q6QHC5 323 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 C10orf99Q6UWK7 81 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ZBTB49Q6ZSB9 765 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 MOB3CQ70IA8 216 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ZNF573Q86YE8 665 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 OSR2Q8N2R0 312 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 RNF148Q8N7C7 305 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 OR51D1Q8NGF3 324 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 THEM6Q8WUY1 208 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 NSMCE2Q96MF7 247 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 ZNF714Q96N38 554 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 CHID1Q9BWS9 393 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 MED20Q9H944 212 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 FAM206AQ9NX38 181 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 DNAJB9Q9UBS3 223 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 KLHDC2Q9Y2U9 406 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 LSM4Q9Y4Z0 139 aaKnown RBP6.52□□□□□ -1.37
USP39-216ENST00000490193 SESN1Q9Y6P5 492 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 TENM2Q9NT68 2774 aa6.52□□□□□ -1.37
USP39-216ENST00000490193 PQLC2LA1A4F0 135 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 ARPC2O15144 300 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 PRODHO43272 600 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 SELENOFO60613 162 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 RAMP3O60896 148 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 DNAJC8O75937 253 aaPredicted RBP6.51□□□□□ -1.37
USP39-216ENST00000490193 OR2F2O95006 317 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 CCNB2O95067 398 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 SOX14O95416 240 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 NRASP01111 189 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 LPLP06858 475 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 CHRM2P08172 466 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 ALOX5APP20292 161 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 LMO1P25800 156 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 HTR1DP28221 377 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 BRS3P32247 399 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 HAAOP46952 286 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 DGCR2P98153 550 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 ABCA11PQ4W5N1 156 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 KLHL22Q53GT1 634 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 DMRTC1Q5HYR2 192 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 ZNF684Q5T5D7 378 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 UNQ9370/PRO34162Q6UXP9 181 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 CD300LDQ6UXZ3 194 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 HDXQ7Z353 690 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 OR8H2Q8N162 312 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 AQP11Q8NBQ7 271 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 OR4P4Q8NGL7 312 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 NDNFQ8TB73 568 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 CMTM5Q96DZ9 223 aa6.51□□□□□ -1.37
USP39-216ENST00000490193 RBM14Q96PK6 669 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms