RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 BRS3P32247 399 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM196Q5HYL7 178 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 FAM219AQ8IW50 185 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 TP53I13Q8NBR0 393 aaPredicted RBP7.9□□□□□ -1.14
LSAMP-205ENST00000490035 C3orf85A0A1B0GTC6 90 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 OR2T8A6NH00 312 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 CD1AP06126 327 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 SFTA3P0C7M3 94 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 RPEL1Q2QD12 228 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 NPAS1Q99742 590 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM210A6NLX4 147 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 SLC6A1P30531 599 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 HNRNPA3P51991 378 aaKnown RBP7.9□□□□□ -1.14
LSAMP-205ENST00000490035 DHRS2Q13268 280 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 VAMP3Q15836 100 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 MPV17LQ2QL34 196 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 GGNBP1Q5YKI7 109 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.14
LSAMP-205ENST00000490035 ZNF785A8K8V0 405 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 SP1P08047 785 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 ASTLQ6HA08 431 aaPredicted RBP7.9□□□□□ -1.14
LSAMP-205ENST00000490035 LIMS2Q7Z4I7 341 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM179BQ7Z7N9 219 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 ROBO4Q8WZ75 1007 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 OR1A1Q9P1Q5 309 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 WSB1Q9Y6I7 421 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 TRAV38-1A0A0B4J264 116 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 OR2M5A3KFT3 312 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 MBTPS2O43462 519 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 NGFP01138 241 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 CRYBA1P05813 215 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 COL19A1Q14993 1142 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 TMEM123Q8N131 208 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 SLC26A10Q8NG04 563 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 C4orf45Q96LM5 186 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 MED29Q9NX70 200 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 ANKRD10Q9NXR5 420 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 ZNF835Q9Y2P0 537 aa7.9□□□□□ -1.14
LSAMP-205ENST00000490035 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.9□□□□□ -1.15
LSAMP-205ENST00000490035 TRDCB7Z8K6 153 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 IGHA2P01877 340 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 CD96P40200 585 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 YBX1P67809 324 aaKnown RBP7.9□□□□□ -1.15
LSAMP-205ENST00000490035 DOLPP1Q86YN1 238 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 RAB24Q969Q5 203 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 COX14Q96I36 57 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 WSB2Q9NYS7 404 aaPredicted RBP7.9□□□□□ -1.15
LSAMP-205ENST00000490035 TMEFF2Q9UIK5 374 aaPredicted RBP7.9□□□□□ -1.15
LSAMP-205ENST00000490035 B4GALT1P15291 398 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 FAHP16930 419 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 GFRALQ6UXV0 394 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 OR10V1Q8NGI7 309 aa7.9□□□□□ -1.15
LSAMP-205ENST00000490035 CST2P09228 141 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 SLC38A11Q08AI6 406 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 FOXF1Q12946 379 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 CES1P1Q9UKY3 287 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 XIRP1Q702N8 1843 aaKnown RBP7.89□□□□□ -1.15
LSAMP-205ENST00000490035 PLPP3O14495 311 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 CDC14BO60729 498 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 CTSDP07339 412 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-205ENST00000490035 EPHA2P29317 976 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 FCER1GP30273 86 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 TMEM215Q68D42 235 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 HSD17B13Q7Z5P4 300 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-205ENST00000490035 OR4C3Q8NH37 302 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 MCHR2Q969V1 340 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 LTB4R2Q9NPC1 389 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 KLK11Q9UBX7 282 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 TMEM272A0A1B0GTI8 110 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 A0A1W2PPQ1 181 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 ANKRD20A5PA0PJZ0 165 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 MASP2O00187 686 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 P2RX3P56373 397 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 KLF3P57682 345 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-205ENST00000490035 OR1C1Q15619 314 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 PRSS42Q7Z5A4 293 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 ANGPTL4Q9BY76 406 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 IFT22Q9H7X7 185 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 HCSTQ9UBK5 93 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 IAPPP10997 89 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 MMP9P14780 707 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 HLA-GP17693 338 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 ACP1P24666 158 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 TMEM267Q0VDI3 215 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-205ENST00000490035 FAM209AQ5JX71 171 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 VASH2Q86V25 355 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 WFDC8Q8IUA0 241 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 OR2C3Q8N628 320 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 HSD17B10Q99714 261 aaKnown RBP7.89□□□□□ -1.15
LSAMP-205ENST00000490035 ZFP64Q9NPA5 681 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 NXPH3O95157 252 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 GOSR1O95249 250 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 IGHV3-9P01782 118 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 C9orf152Q5JTZ5 239 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 OR4C5Q8NGB2 326 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 TXNDC17Q9BRA2 123 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 HSPB8Q9UJY1 196 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 MPC2O95563 127 aa7.89□□□□□ -1.15
LSAMP-205ENST00000490035 HOXD4P09016 255 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-205ENST00000490035 USF1P22415 310 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms