RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 S100A13Q99584 98 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 NKX3-1Q99801 234 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-210ENST00000489948 METTL9Q9H1A3 318 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 MMP27Q9H306 513 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 HES4Q9HCC6 221 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 MTCH1Q9NZJ7 389 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 OR5V1Q9UGF6 321 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 PPP1R3CQ9UQK1 317 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 DYSFO75923 2080 aa11.28□□□□□ -0.6
TRAIP-210ENST00000489948 TRAPPC2LH3BP13 241 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 ANGPTL7O43827 346 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 RHBDL1O75783 438 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 FSTL3O95633 263 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 CLDN12P56749 244 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 UNC119Q13432 240 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 RSU1Q15404 277 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 FAM189A2Q15884 450 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 ZNF787Q6DD87 383 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 MZT2AQ6P582 158 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A1Q86YD7 464 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 OR51D1Q8NGF3 324 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 OR11L1Q8NGX0 322 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 MCFD2Q8NI22 146 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 KCNG3Q8TAE7 436 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 SLAMF9Q96A28 289 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.61
TRAIP-210ENST00000489948 ZNF701Q9NV72 531 aaPredicted RBP11.27□□□□□ -0.61
TRAIP-210ENST00000489948 C1orf123Q9NWV4 160 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 NPTNQ9Y639 398 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 SPG11Q96JI7 2443 aa11.27□□□□□ -0.61
TRAIP-210ENST00000489948 VPS13CQ709C8 3753 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 A0A0B4J203 849 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 IGHV1-69-2A0A0G2JMI3 117 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 TMEM272A0A1B0GTI8 110 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 LRRC30A6NM36 301 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 TPD52L2O43399 206 aaKnown RBP11.26□□□□□ -0.61
TRAIP-210ENST00000489948 RP2O75695 350 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 CLPXO76031 633 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 PAHP00439 452 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 PLATP00750 562 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 LHBP01229 141 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 HPXP02790 462 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 SFTPBP07988 381 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 SNRPBP14678 240 aaKnown RBP11.26□□□□□ -0.61
TRAIP-210ENST00000489948 PMELP40967 661 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 FGF12P61328 243 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 C2orf76Q3KRA6 126 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 LINC00596Q86U02 117 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 C1orf87Q8N0U7 546 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 GCSAMQ8N6F7 178 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 OR51T1Q8NGJ9 327 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 SLC25A38Q96DW6 304 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 WDFY2Q96P53 400 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 TM2D1Q9BX74 207 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 TMEM59Q9BXS4 323 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 ABCG5Q9H222 651 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 MYOZ1Q9NP98 299 aaPredicted RBP11.26□□□□□ -0.61
TRAIP-210ENST00000489948 DLL4Q9NR61 685 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 UFSP2Q9NUQ7 469 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 RASL12Q9NYN1 266 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
TRAIP-210ENST00000489948 hCG_1807616A0A1W2PRN6 198 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A10PA6NDY2 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A18PA6NE21 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A16PA6NEW6 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A20PA6NIJ5 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A8PA6NJQ4 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A7PA6NKC0 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A22PA8MWA6 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A12PA8MX19 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A5PA8MXJ8 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A23PA8MXZ1 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 AKR7A2O43488 359 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 CDC14BO60729 498 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 SCGNO76038 276 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 F12P00748 615 aaPredicted RBP11.25□□□□□ -0.61
TRAIP-210ENST00000489948 APOA1P02647 267 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 CSTBP04080 98 aaKnown RBP11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A15PP0C7V4 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A13PP0C7W8 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A14PP0C7W9 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 FAM90A24PP0C7X0 464 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 GTF2F2P13984 249 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 MGMTP16455 207 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 BCL3P20749 454 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 SERPINA2P20848 420 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 CDKN1AP38936 164 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 NPBWR2P48146 333 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 EFNA4P52798 201 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 RPS27AP62979 156 aaKnown RBP11.25□□□□□ -0.61
TRAIP-210ENST00000489948 IL13RA2Q14627 380 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 SMIM21Q3B7S5 101 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 SLC22A6Q4U2R8 563 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 SPIN3Q5JUX0 258 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 ZNF826PQ6ZT77 177 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 LRRC28Q86X40 367 aaPredicted RBP11.25□□□□□ -0.61
TRAIP-210ENST00000489948 TMEM104Q8NE00 496 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms