RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 AQP3Q92482 292 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 GTF3AQ92664 365 aaKnown RBP18.41■□□□□ 0.54
SMC4-221ENST00000489573 MTCH1Q9NZJ7 389 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 TBC1D24Q9ULP9 559 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 POLDIP2Q9Y2S7 368 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 RNF115Q9Y4L5 304 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 CADP27708 2225 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 WIPF3A6NGB9 483 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 SOCS1O15524 211 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 LANCL1O43813 399 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 OR4A8P0C604 315 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 NPBWR2P48146 333 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 NKPD1Q17RQ9 610 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 ZNF260Q3ZCT1 412 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 HACD4Q5VWC8 232 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 ELP2Q6IA86 826 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 POC5Q8NA72 575 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 SCCPDHQ8NBX0 429 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 OR2Z1Q8NG97 314 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 OR52I2Q8NH67 350 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 PLK3Q9H4B4 646 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 HIVEP3Q5T1R4 2406 aa18.4■□□□□ 0.54
SMC4-221ENST00000489573 GRPP07492 148 aa18.39■□□□□ 0.53
SMC4-221ENST00000489573 PRSS3P35030 304 aa18.39■□□□□ 0.53
SMC4-221ENST00000489573 MAB21L1Q13394 359 aa18.39■□□□□ 0.53
SMC4-221ENST00000489573 DNM1P46Q6ZS02 220 aa18.39■□□□□ 0.53
SMC4-221ENST00000489573 FBXL14Q8N1E6 418 aa18.39■□□□□ 0.53
SMC4-221ENST00000489573 RAB3CQ96E17 227 aa18.39■□□□□ 0.53
SMC4-221ENST00000489573 HCFC1P51610 2035 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 FOXI3A8MTJ6 420 aaPredicted RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 SIAH2O43255 324 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 AKR7A2O43488 359 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 GABRR1P24046 479 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 CD200P41217 278 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 FGF12P61328 243 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 ASAH1Q13510 395 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 CDNFQ49AH0 187 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 ZNF57Q68EA5 555 aaPredicted RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 Q6ZTK2 550 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 BATF2Q8N1L9 274 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 ELMOD3Q96FG2 381 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 TLNRD1Q9H1K6 362 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 ZMAT3Q9HA38 289 aaKnown RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 RBFOX1Q9NWB1 397 aaKnown RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 LINC00854A0A1B0GVQ3 168 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 MEIOCA2RUB1 952 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 TMEM235A6NFC5 223 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 DEFB108AA8MXU0 73 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 E7EQL1 145 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 SULT1C2O00338 296 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 CDIPTO14735 213 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 RHBDL1O75783 438 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 HIST1H1DP16402 221 aaKnown RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 GNB3P16520 340 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 BLVRBP30043 206 aaPredicted RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 RBM11P57052 281 aaKnown RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 PIGYQ3MUY2 71 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 PLAC9Q5JTB6 97 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 POM121Q96HA1 1249 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 SCPEP1Q9HB40 452 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 RHOFQ9HBH0 211 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 ST3GAL6Q9Y274 331 aa18.38■□□□□ 0.53
SMC4-221ENST00000489573 RBMX2Q9Y388 322 aaKnown RBP18.38■□□□□ 0.53
SMC4-221ENST00000489573 IGHV3-64DA0A0J9YX35 117 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 GSTP1P09211 210 aaKnown RBP18.37■□□□□ 0.53
SMC4-221ENST00000489573 LOXP28300 417 aaPredicted RBP18.37■□□□□ 0.53
SMC4-221ENST00000489573 GDNFP39905 211 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 KIR2DL3P43628 341 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 ZNF81P51508 661 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 TMEM50BP56557 158 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 GUCA2AQ02747 115 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 TAF9Q16594 264 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 PRAMEF6Q5VXH4 476 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 PIK3IP1Q96FE7 263 aa18.37■□□□□ 0.53
SMC4-221ENST00000489573 A6NLC8 198 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 F8VVB4 439 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 F8VWA3 439 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 MFNGO00587 321 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 SPRY3O43610 288 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 ORC5O43913 435 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 LPLP06858 475 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 MELTFP08582 738 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 NHLRC3Q5JS37 347 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 RTN4RL2Q86UN3 420 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 Q8IYB0 196 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 TOMM5Q8N4H5 51 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 GPX8Q8TED1 209 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 CHPT1Q8WUD6 406 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 NEUROG1Q92886 237 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 ARHGAP5-AS1Q96IT6 56 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 ZNF488Q96MN9 340 aa18.36■□□□□ 0.53
SMC4-221ENST00000489573 H7C417 338 aa18.35■□□□□ 0.53
SMC4-221ENST00000489573 GEMIN2O14893 280 aaKnown RBP18.35■□□□□ 0.53
SMC4-221ENST00000489573 PLA2G10O15496 165 aa18.35■□□□□ 0.53
SMC4-221ENST00000489573 PTBP3O95758 552 aaKnown RBP18.35■□□□□ 0.53
SMC4-221ENST00000489573 PTTG1O95997 202 aa18.35■□□□□ 0.53
SMC4-221ENST00000489573 PLAUP00749 431 aa18.35■□□□□ 0.53
SMC4-221ENST00000489573 PGA5P0DJD9 388 aa18.35■□□□□ 0.53
SMC4-221ENST00000489573 SERPINF1P36955 418 aa18.35■□□□□ 0.53
SMC4-221ENST00000489573 ARL6IP1Q15041 203 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms