RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 LCN1P1Q5VSP4 162 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 REC114Q7Z4M0 266 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 TMEM219Q86XT9 240 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 CALHM1Q8IU99 346 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
CPSF3-204ENST00000489403 ASB17Q8WXJ9 295 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 MMP28Q9H239 520 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 MOB1AQ9H8S9 216 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 TVP23BQ9NYZ1 205 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 IKZF2Q9UKS7 526 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 TBL2Q9Y4P3 447 aaKnown RBP10.01□□□□□ -0.81
CPSF3-204ENST00000489403 TMEM14AQ9Y6G1 99 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 V9GYS6 101 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 A0A1B0GTI1 187 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 MEX3AA1L020 520 aaKnown RBP10□□□□□ -0.81
CPSF3-204ENST00000489403 A6NDX4 124 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 A6NIN4 97 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 AQP12BA6NM10 295 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 LOC110117498-PIK3R3F6TDL0 507 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 MAGEB4O15481 346 aaPredicted RBP10□□□□□ -0.81
CPSF3-204ENST00000489403 ARG1P05089 322 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 ERVK11-1P61568 191 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 COL10A1Q03692 680 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 CNN3Q15417 329 aaKnown RBP10□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF626Q68DY1 528 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 PLEKHG7Q6ZR37 379 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 ANGPTL5Q86XS5 388 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 NDUFA11Q86Y39 141 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 AQP12AQ8IXF9 295 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 OR4S1Q8NGB4 309 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 OR14K1Q8NGZ2 314 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 MRAPQ8TCY5 172 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 RPS4Y2Q8TD47 263 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 FOXRED1Q96CU9 486 aaPredicted RBP10□□□□□ -0.81
CPSF3-204ENST00000489403 CNN2Q99439 309 aaKnown RBP10□□□□□ -0.81
CPSF3-204ENST00000489403 CDCA4Q9BXL8 241 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 TEX12Q9BXU0 123 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 GTF2A1LQ9UNN4 478 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF281Q9Y2X9 895 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 R4GMQ9 66 aa10□□□□□ -0.81
CPSF3-204ENST00000489403 K7N7A8 449 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 XPNPEP2O43895 674 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 PRKYO43930 277 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 CRISP1P54107 249 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 CXCR4P61073 352 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 ESRRGP62508 458 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 IL24Q13007 206 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 SSX2Q16385 188 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 Q6ZSR3 168 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 TCF23Q7RTU1 214 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 BCDIN3DQ7Z5W3 292 aaKnown RBP9.99□□□□□ -0.81
CPSF3-204ENST00000489403 ELMOD2Q8IZ81 293 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 ASCC1Q8N9N2 400 aaKnown RBP9.99□□□□□ -0.81
CPSF3-204ENST00000489403 OR11H6Q8NGC7 330 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 OR13D1Q8NGV5 346 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 R3HDM4Q96D70 268 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 MALSU1Q96EH3 234 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
CPSF3-204ENST00000489403 APOL4Q9BPW4 351 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 THTPAQ9BU02 230 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 WNT10AQ9GZT5 417 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 ABCB10Q9NRK6 738 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 AURKAIP1Q9NWT8 199 aaPredicted RBP9.99□□□□□ -0.81
CPSF3-204ENST00000489403 PITPNC1Q9UKF7 332 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 OR52A1Q9UKL2 312 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 SLC22A13Q9Y226 551 aa9.99□□□□□ -0.81
CPSF3-204ENST00000489403 M0R129 80 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF737O75373 536 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 ALX3O95076 343 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 RBP4P02753 201 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF728P0DKX0 622 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 IGHV1-8P0DP01 117 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 JUNBP17275 347 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-204ENST00000489403 EDDM3BP56851 147 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 CBX1P83916 185 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 EMX1Q04741 257 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-204ENST00000489403 BCL2L15Q5TBC7 163 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF322Q6U7Q0 402 aaPredicted RBP9.98□□□□□ -0.81
CPSF3-204ENST00000489403 Q6ZS46 218 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 SLC35F2Q8IXU6 374 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 OR4F17Q8NGA8 305 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 TRMT10AQ8TBZ6 339 aaKnown RBP9.98□□□□□ -0.81
CPSF3-204ENST00000489403 PHF21AQ96BD5 680 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 OR4F4Q96R69 305 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 OR5M11Q96RB7 305 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 PKIBQ9C010 78 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 PRSS22Q9GZN4 317 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 PAPOLBQ9NRJ5 636 aaKnown RBP9.98□□□□□ -0.81
CPSF3-204ENST00000489403 NECAP2Q9NVZ3 263 aa9.98□□□□□ -0.81
CPSF3-204ENST00000489403 MRM2Q9UI43 246 aaKnown RBP9.98□□□□□ -0.81
CPSF3-204ENST00000489403 FAM230AA0A1W2PPH8 454 aa9.97□□□□□ -0.81
CPSF3-204ENST00000489403 DHRS7CA6NNS2 312 aa9.97□□□□□ -0.81
CPSF3-204ENST00000489403 F8VVB4 439 aa9.97□□□□□ -0.81
CPSF3-204ENST00000489403 F8VWA3 439 aa9.97□□□□□ -0.81
CPSF3-204ENST00000489403 FKBP6O75344 327 aa9.97□□□□□ -0.81
CPSF3-204ENST00000489403 CHRM2P08172 466 aa9.97□□□□□ -0.81
CPSF3-204ENST00000489403 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms