RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TMEM251Q8N6I4 163 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 RBMXL3Q8N7X1 1067 aaKnown RBP7.34□□□□□ -1.23
VTI1A-207ENST00000489357 TMEM104Q8NE00 496 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF680Q8NEM1 530 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 OR8H1Q8NGG4 311 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 OR5M8Q8NGP6 311 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 OR4K15Q8NH41 348 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 MITD1Q8WV92 249 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ROBO4Q8WZ75 1007 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ST8SIA4Q92187 359 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 PIGTQ969N2 578 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FBXW5Q969U6 566 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 Q96M66 194 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 SIGLEC12Q96PQ1 595 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ALKBH3Q96Q83 286 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-207ENST00000489357 WNT5BQ9H1J7 359 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 HEXA-AS1Q9H8Q6 139 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 BEX1Q9HBH7 125 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 KCNN3Q9UGI6 736 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 UBQLN2Q9UHD9 624 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 SLC7A11Q9UPY5 501 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 TP53TG5Q9Y2B4 290 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 KCNK7Q9Y2U2 307 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 AUP1Q9Y679 476 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ALPK2Q86TB3 2170 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 CACNA1CQ13936 2221 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 MYO18BQ8IUG5 2567 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 A0A0D9SG52 128 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 LINC00862A6NCI5 91 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 RFPL4AA6NLU0 287 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 MCRIP1C9JLW8 97 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 RFPL4AL1F8VTS6 287 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SMLR1H3BR10 107 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 L7N2F9 121 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 M0QYG6 137 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SSX5O60225 188 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 NOS1APO75052 506 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 CNOT4O95628 575 aaKnown RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 NRASP01111 189 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 HLA-AP01891 365 aaKnown RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 CSTBP04080 98 aaKnown RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 LCATP04180 440 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SLC25A4P12235 298 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 PLA2G2AP14555 144 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 B4GALT1P15291 398 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 GNB3P16520 340 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 FAHP16930 419 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 ZBTB25P24278 435 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 FPR2P25090 351 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 S100A11P31949 105 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 NTF4P34130 210 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 HRH1P35367 487 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 HTR2BP41595 481 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 AP2S1P53680 142 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 ATP1B3P54709 279 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 MTCP1P56278 107 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 TMEM50BP56557 158 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 H2BFSP57053 126 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 RAB14P61106 215 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 PLGLB1Q02325 96 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 ARFRP1Q13795 201 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SLC10A1Q14973 349 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SRSF7Q16629 238 aaKnown RBP eCLIP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SNAI3Q3KNW1 292 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 PLEKHN1Q494U1 663 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SLC22A6Q4U2R8 563 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 PLAC9Q5JTB6 97 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 ZNF774Q6NX45 483 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 CRIP3Q6Q6R5 217 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 Q6ZS92 163 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 RFPL4BQ6ZWI9 263 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 LHFPL1Q86WI0 220 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 CCDC36Q8IYA8 594 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 CSNK2A3Q8NEV1 391 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 Q8NFD4 153 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 OR51T1Q8NGJ9 327 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 OR5H2Q8NGV7 314 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 ABHD3Q8WU67 409 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 DVL3Q92997 716 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 APOBEC3DQ96AK3 386 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 APH1AQ96BI3 265 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 BORCS8Q96FH0 119 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 PLPPR2Q96GM1 343 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 RHOFQ9HBH0 211 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 ZNF71Q9NQZ8 489 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-207ENST00000489357 CA10Q9NS85 328 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 DECR2Q9NUI1 292 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 SLC23A1Q9UHI7 598 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 KIF25Q9UIL4 384 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 ESPL1Q14674 2120 aa7.33□□□□□ -1.24
VTI1A-207ENST00000489357 HIVEP3Q5T1R4 2406 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 ZNF407Q9C0G0 2248 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 A0A0A6YYD4 124 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 C9orf170A2RU37 121 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 MEIS3P1A6NDR6 274 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 A6NL46 340 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 DBX1A6NMT0 343 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 E9PLN8 166 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 GOSR2O14653 212 aa7.32□□□□□ -1.24
VTI1A-207ENST00000489357 SOCS1O15524 211 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms