RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ADAT3Q96EY9 351 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-206ENST00000489142 CHST5Q9GZS9 411 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 HES4Q9HCC6 221 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 S100A14Q9HCY8 104 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 IL36RNQ9UBH0 155 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 SLC7A11Q9UPY5 501 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 POMT1Q9Y6A1 747 aa11.47□□□□□ -0.57
VTI1A-206ENST00000489142 J3QLW9 94 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 J3QRE1 110 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 M0R1W7 72 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 SLC1A7O00341 560 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 SPRY1O43609 319 aaPredicted RBP11.46□□□□□ -0.57
VTI1A-206ENST00000489142 NOS1APO75052 506 aaPredicted RBP11.46□□□□□ -0.57
VTI1A-206ENST00000489142 UBCP0CG48 685 aaKnown RBP11.46□□□□□ -0.57
VTI1A-206ENST00000489142 CALCBP10092 127 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 CCL3L1P16619 93 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 ZNF19P17023 458 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 RPL31P62899 125 aaKnown RBP11.46□□□□□ -0.57
VTI1A-206ENST00000489142 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 ZNF91Q05481 1191 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 BLMHQ13867 455 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 TAF9Q16594 264 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 OCLNQ16625 522 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 LDLRAD3Q86YD5 345 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 MKXQ8IYA7 352 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 ZNF561Q8N587 486 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 TMEM86BQ8N661 226 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 SGMS2Q8NHU3 365 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 TBC1D15Q8TC07 691 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 TRUB1Q8WWH5 349 aaKnown RBP11.46□□□□□ -0.57
VTI1A-206ENST00000489142 LGALS12Q96DT0 336 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 PKIBQ9C010 78 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 METTL8Q9H825 291 aaKnown RBP11.46□□□□□ -0.57
VTI1A-206ENST00000489142 AMBNQ9NP70 447 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 MTCH1Q9NZJ7 389 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 FRRS1LQ9P0K9 344 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 DSCAML1Q8TD84 2053 aa11.46□□□□□ -0.57
VTI1A-206ENST00000489142 PKD1L1Q8TDX9 2849 aa11.46□□□□□ -0.58
VTI1A-206ENST00000489142 TRBV23-1A0A0A0MS06 115 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 EBAG9O00559 213 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 SLC16A6O15403 523 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 GATBO75879 557 aaKnown RBP11.45□□□□□ -0.58
VTI1A-206ENST00000489142 PAHP00439 452 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 FBP1P09467 338 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 GABRB1P18505 474 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 SNU13P55769 128 aaKnown RBP11.45□□□□□ -0.58
VTI1A-206ENST00000489142 ERVK11-1P61568 191 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 ACTC1P68032 377 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 ACTA1P68133 377 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 COL10A1Q03692 680 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 IL24Q13007 206 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 ZNF273Q14593 569 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 SLC25A30Q5SVS4 291 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 NCR3LG1Q68D85 454 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 TMEM200BQ69YZ2 307 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 SLC25A26Q70HW3 274 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 LHFPL3Q86UP9 236 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 ENTHD1Q8IYW4 607 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 ASCC1Q8N9N2 400 aaKnown RBP11.45□□□□□ -0.58
VTI1A-206ENST00000489142 OR51A4Q8NGJ6 313 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 RFT1Q96AA3 541 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 FGGYQ96C11 551 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 BORCS8Q96FH0 119 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 C4orf36Q96KX1 117 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 CEP19Q96LK0 163 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 C9orf16Q9BUW7 83 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 MYRFQ9Y2G1 1151 aa11.45□□□□□ -0.58
VTI1A-206ENST00000489142 IGKV1-9A0A0C4DH69 117 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 BAG2O95816 211 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 KNG1P01042 644 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 TK1P04183 234 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 HTR1AP08908 422 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 DBTP11182 482 aaKnown RBP11.44□□□□□ -0.58
VTI1A-206ENST00000489142 ZNF20P17024 532 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 BCL3P20749 454 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 COX7A1P24310 79 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 NPBWR2P48146 333 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 POU3F4P49335 361 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 BMXP51813 675 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 UBE2E1P51965 193 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 FUT6P51993 359 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 CNN3Q15417 329 aaKnown RBP11.44□□□□□ -0.58
VTI1A-206ENST00000489142 MEDAGQ5VYS4 303 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 ZNF782Q6ZMW2 699 aaPredicted RBP11.44□□□□□ -0.58
VTI1A-206ENST00000489142 ZBTB49Q6ZSB9 765 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 RNF144BQ7Z419 303 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 PQLC1Q8N2U9 271 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 ACBD7Q8N6N7 88 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 OR4F5Q8NH21 305 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 WFDC12Q8WWY7 111 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 DYRK2Q92630 601 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 PELI1Q96FA3 418 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 SPACA5Q96QH8 159 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 ALG8Q9BVK2 526 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 DPAGT1Q9H3H5 408 aa11.44□□□□□ -0.58
VTI1A-206ENST00000489142 ISG20L2Q9H9L3 353 aaKnown RBP11.44□□□□□ -0.58
VTI1A-206ENST00000489142 RBFOX1Q9NWB1 397 aaKnown RBP11.44□□□□□ -0.58
VTI1A-206ENST00000489142 EXOGQ9Y2C4 368 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms