RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 YWHAEP62258 255 aaKnown RBP1.38□□□□□ -2.19
PTPN4-212ENST00000488896 MAPRE2Q15555 327 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 HIKESHIQ53FT3 197 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 ANGPTL8Q6UXH0 198 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 MRPL21Q7Z2W9 205 aaKnown RBP1.38□□□□□ -2.19
PTPN4-212ENST00000488896 PRNTQ86SH4 94 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 ITPRIPQ8IWB1 547 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 SLC7A5P1Q8MH63 180 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 BBOF1Q8ND07 529 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 OR52K2Q8NGK3 314 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 PIH1D2Q8WWB5 315 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 OR8D1Q8WZ84 308 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 TNFRSF14Q92956 283 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 ZNF707Q96C28 371 aaPredicted RBP1.38□□□□□ -2.19
PTPN4-212ENST00000488896 CERS2Q96G23 380 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 MRPL48Q96GC5 212 aaKnown RBP1.38□□□□□ -2.19
PTPN4-212ENST00000488896 IQCGQ9H095 443 aaKnown RBP1.38□□□□□ -2.19
PTPN4-212ENST00000488896 CYP3A43Q9HB55 503 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 WDR19Q8NEZ3 1342 aa1.38□□□□□ -2.19
PTPN4-212ENST00000488896 TRAV8-4A0A0B4J246 113 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 DFFAO00273 331 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 P01737 135 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 P0DMU3 169 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 FAM231AP0DMU4 169 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 FAM231CP0DMU5 169 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 CFHR2P36980 270 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 LGALS7P47929 136 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 ZNF83P51522 516 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 KRTAP21-3Q3LHN1 58 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 LINC00303Q3SY05 128 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 ULK3Q6PHR2 472 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 TMEM144Q7Z5S9 345 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 LINC00337Q8N6G1 96 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 AGR3Q8TD06 166 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 ING5Q8WYH8 240 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 SLC25A44Q96H78 314 aaPredicted RBP1.37□□□□□ -2.19
PTPN4-212ENST00000488896 CLSTN2Q9H4D0 955 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 RDH14Q9HBH5 336 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 TMEM38BQ9NVV0 291 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 ACOT9Q9Y305 439 aa1.37□□□□□ -2.19
PTPN4-212ENST00000488896 A0A1B0GTQ1 180 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 MYBPHLA2RUH7 354 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 NCF1BA6NI72 391 aaPredicted RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 NCF1CA8MVU1 366 aaPredicted RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 NDUFS5O43920 106 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 HMMRO75330 724 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 CXorf1O96002 111 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 STAG3L3P0CL85 134 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 HLA-GP17693 338 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 TEAD1P28347 426 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 TUFMP49411 452 aaKnown RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 HCCSP53701 268 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 PSMD4P55036 377 aaKnown RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 DAOAP59103 153 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 PMVKQ15126 192 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 FBXL19-AS1Q494R0 122 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 EPGNQ6UW88 154 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 TRMT10CQ7L0Y3 403 aaKnown RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 TMCO2Q7Z6W1 182 aaPredicted RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 VTCN1Q7Z7D3 282 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 ZDHHC22Q8N966 263 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 OR10Z1Q8NGY1 313 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 TCP10LQ8TDR4 215 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 TFGQ92734 400 aaPredicted RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 PEX13Q92968 403 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 DOCK6Q96HP0 2047 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 API5Q9BZZ5 524 aaKnown RBP1.36□□□□□ -2.19
PTPN4-212ENST00000488896 CHRNA10Q9GZZ6 450 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 ICOSQ9Y6W8 199 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 TTC41PQ6P2S7 1318 aa1.36□□□□□ -2.19
PTPN4-212ENST00000488896 NPHP4O75161 1426 aaPredicted RBP1.35□□□□□ -2.19
PTPN4-212ENST00000488896 IGHV2OR16-5A0A0B4J2B6 119 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 PSCAO43653 123 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 IGHV3-53P01767 116 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 ARL14EPLP0DKL9 152 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 SLC6A1P30531 599 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 SPAG1Q07617 926 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 LAMTOR4Q0VGL1 99 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 MRPL2Q5T653 305 aaKnown RBP1.35□□□□□ -2.19
PTPN4-212ENST00000488896 KCTD16Q68DU8 428 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 TTC19Q6DKK2 380 aaPredicted RBP1.35□□□□□ -2.19
PTPN4-212ENST00000488896 OTUD6AQ7L8S5 288 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 OR2W3Q7Z3T1 314 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 CNPY4Q8N129 248 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 ORAOV1Q8WV07 137 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 SPACA5Q96QH8 159 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 C20orf144Q9BQM9 153 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 HIGD2AQ9BW72 106 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 PORCNQ9H237 461 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 BLZF1Q9H2G9 400 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 ORC6Q9Y5N6 252 aa1.35□□□□□ -2.19
PTPN4-212ENST00000488896 BRD4O60885 1362 aaPredicted RBP1.34□□□□□ -2.19
PTPN4-212ENST00000488896 CENPXA8MT69 81 aa1.34□□□□□ -2.19
PTPN4-212ENST00000488896 IGLL5B9A064 214 aa1.34□□□□□ -2.19
PTPN4-212ENST00000488896 ZNF701M0R085 212 aaPredicted RBP1.34□□□□□ -2.19
PTPN4-212ENST00000488896 UPK1AO00322 258 aa1.34□□□□□ -2.19
PTPN4-212ENST00000488896 DHRS3O75911 302 aa1.34□□□□□ -2.19
PTPN4-212ENST00000488896 TPM2P07951 284 aa1.34□□□□□ -2.19
PTPN4-212ENST00000488896 OR4Q2P0C623 313 aa1.34□□□□□ -2.19
PTPN4-212ENST00000488896 RALBP11234 206 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms