RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PLXNB3Q9ULL4 1909 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 RNF113AO15541 343 aaKnown RBP1.56□□□□□ -2.16
CD46-215ENST00000488596 KDELR3O43731 214 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 FSTL3O95633 263 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 SNAI1O95863 264 aaPredicted RBP1.56□□□□□ -2.16
CD46-215ENST00000488596 OTCP00480 354 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 OR4Q2P0C623 313 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 ATP5J2P56134 94 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 OR12D2P58182 307 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 TAS2R60P59551 318 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 FMODQ06828 376 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 ELOCQ15369 112 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 TAL2Q16559 108 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 NKAIN1Q4KMZ8 207 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 HSP90AA4PQ58FG1 418 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 SETD3Q86TU7 594 aaPredicted RBP1.56□□□□□ -2.16
CD46-215ENST00000488596 ZDHHC22Q8N966 263 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 ASCC1Q8N9N2 400 aaKnown RBP1.56□□□□□ -2.16
CD46-215ENST00000488596 ZFAND1Q8TCF1 268 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 FAM131CQ96AQ9 280 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 NAP1L5Q96NT1 182 aaPredicted RBP1.56□□□□□ -2.16
CD46-215ENST00000488596 SPACA5Q96QH8 159 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 ZNF649Q9BS31 505 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 COA1Q9GZY4 146 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 TDRD3Q9H7E2 651 aaKnown RBP1.56□□□□□ -2.16
CD46-215ENST00000488596 TMEM38BQ9NVV0 291 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 PRO0628Q9UI54 55 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 RAB23Q9ULC3 237 aa1.56□□□□□ -2.16
CD46-215ENST00000488596 AQRO60306 1485 aaKnown RBP eCLIP1.56□□□□□ -2.163e-7■■■□□ 16.2
CD46-215ENST00000488596 BAZ1BQ9UIG0 1483 aaKnown RBP1.56□□□□□ -2.16
CD46-215ENST00000488596 LTBP4Q8N2S1 1624 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 SEC14L6B5MCN3 397 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 C4orf51C9J302 202 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 M0R1B8 84 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 RFXANKO14593 260 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 ALOX12BO75342 701 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 KCNK2O95069 426 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 CXorf1O96002 111 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 HRES1P13985 223 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 PTNP21246 168 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 CPN2P22792 545 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 P2RY2P41231 377 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 MEF2CQ06413 473 aaPredicted RBP1.55□□□□□ -2.16
CD46-215ENST00000488596 TAF9Q16594 264 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 CDNFQ49AH0 187 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 DEFB134Q4QY38 66 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 FAM104BQ5XKR9 115 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 KCTD16Q68DU8 428 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 C16orf87Q6PH81 154 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 CLEC19AQ6UXS0 136 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 FAM231DQ6ZW35 169 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 TRMT10CQ7L0Y3 403 aaKnown RBP1.55□□□□□ -2.16
CD46-215ENST00000488596 FA2HQ7L5A8 372 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 ZNF664Q8N3J9 261 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 ATPAF2Q8N5M1 289 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 CCNYL1Q8N7R7 359 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 ZFP62Q8NB50 900 aaPredicted RBP1.55□□□□□ -2.16
CD46-215ENST00000488596 NT5CQ8TCD5 201 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 CACNG8Q8WXS5 425 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 TNFRSF14Q92956 283 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 MAP1LC3CQ9BXW4 147 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 PLA2G12AQ9BZM1 189 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 TM6SF2Q9BZW4 377 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 SLC38A1Q9H2H9 487 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 TRIM45Q9H8W5 580 aaPredicted RBP1.55□□□□□ -2.16
CD46-215ENST00000488596 FAM60AQ9NP50 221 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 ABCB9Q9NP78 766 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 PARP11Q9NR21 331 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 RBM22Q9NW64 420 aaKnown RBP eCLIP1.55□□□□□ -2.163e-7■■■■□ 23.7
CD46-215ENST00000488596 SLC7A11Q9UPY5 501 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 ZNF706Q9Y5V0 76 aaPredicted RBP1.55□□□□□ -2.16
CD46-215ENST00000488596 AK9Q5TCS8 1911 aa1.55□□□□□ -2.16
CD46-215ENST00000488596 SHANK1Q9Y566 2161 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 SLC5A10A0PJK1 596 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 ENSAO43768 121 aaKnown RBP1.54□□□□□ -2.16
CD46-215ENST00000488596 CSTAP01040 98 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 IGLV6-57P01721 117 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 IGHG2P01859 326 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 CDK1P06493 297 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 INAFM2P0DMQ5 153 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 TAC1P20366 129 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 TEAD1P28347 426 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 ACOT2P49753 483 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 XIAPP98170 497 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 BIKQ13323 160 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 HNRNPA1L2Q32P51 320 aaKnown RBP1.54□□□□□ -2.16
CD46-215ENST00000488596 LDLRAD2Q5SZI1 272 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 LIN9Q5TKA1 542 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 SLC25A25Q6KCM7 469 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 APOBEC3HQ6NTF7 200 aaKnown RBP1.54□□□□□ -2.16
CD46-215ENST00000488596 NELFCDQ8IXH7 590 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 CA13Q8N1Q1 262 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 OR4C13Q8NGP0 309 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 OR8K3Q8NH51 312 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 C22orf15Q8WYQ4 148 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 PPP1R36Q96LQ0 422 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 OR2V2Q96R30 315 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 PEBP4Q96S96 227 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 API5Q9BZZ5 524 aaKnown RBP1.54□□□□□ -2.16
CD46-215ENST00000488596 SRRQ9GZT4 340 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms