RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 IKZF1Q13422 519 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 KRTAP21-3Q3LHN1 58 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 RNLSQ5VYX0 342 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 XAF1Q6GPH4 301 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF788Q6ZQV5 615 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 PRIMA1Q86XR5 153 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 PARP16Q8N5Y8 322 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 NANOGP1Q8N7R0 232 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 OR13C9Q8NGT0 318 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 GHSRQ92847 366 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF488Q96MN9 340 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 MND1Q9BWT6 205 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF281Q9Y2X9 895 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
CXCL12-207ENST00000488591 JMJD1CQ15652 2540 aa12.51□□□□□ -0.41
CXCL12-207ENST00000488591 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 ALX3O95076 343 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 HCKP08631 526 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 SOX2P48431 317 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 ARMCX4Q5H9R4 360 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 DMKNQ6E0U4 476 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-207ENST00000488591 BTN2A1Q7KYR7 527 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 Q8IYB0 196 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 RPS4Y2Q8TD47 263 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 CPNE2Q96FN4 548 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-207ENST00000488591 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 CNBD2Q96M20 576 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 GAFA1Q96PS6 74 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 CDCA4Q9BXL8 241 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 Q9H521 79 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 SMURF1Q9HCE7 757 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 OPN4Q9UHM6 478 aa12.5□□□□□ -0.41
CXCL12-207ENST00000488591 SIRT4Q9Y6E7 314 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-207ENST00000488591 IGKV1D-17A0A075B6S4 117 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 RFPL4AA6NLU0 287 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 C22orf46C9J442 243 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 RFPL4AL1F8VTS6 287 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 SIGLEC5O15389 551 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 SULT1B1O43704 296 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 INMTO95050 263 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 LALBAP00709 142 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 PPIAL4GP0DN37 164 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 ADRA2CP18825 462 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 AMY2BP19961 511 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 RAB3AP20336 220 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 PRDX2P32119 198 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 POU3F4P49335 361 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 YIF1BQ5BJH7 314 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 FIP1L1Q6UN15 594 aaKnown RBP12.49□□□□□ -0.41
CXCL12-207ENST00000488591 C1orf229Q6ZS94 237 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-207ENST00000488591 ZFP41Q8N8Y5 198 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 RGP1Q92546 391 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-207ENST00000488591 TMEM106AQ96A25 262 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 HES4Q9HCC6 221 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 MTCH1Q9NZJ7 389 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 SLC25A10Q9UBX3 287 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-207ENST00000488591 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
CXCL12-207ENST00000488591 A0A1B0GW55 424 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 KNG1P01042 644 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4L2P0CJ85 424 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4L3P0CJ86 424 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4L4P0CJ87 422 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4L5P0CJ88 424 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4L6P0CJ89 424 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4L7P0CJ90 424 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 NDUFB7P17568 137 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 CELP19835 753 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 EPHA1P21709 976 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 CAPZA1P52907 286 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 PPP3R1P63098 170 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 SLC35A2P78381 396 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 BDH1Q02338 343 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 PDZK1IP1Q13113 114 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DGUOKQ16854 277 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 RBM48Q5RL73 367 aaKnown RBP12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4L9Q6RFH8 374 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-207ENST00000488591 BATF2Q8N1L9 274 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF561Q8N587 486 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 H1FXQ92522 213 aaKnown RBP12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DACT3Q96B18 629 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-207ENST00000488591 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DMRTB1Q96MA1 342 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF184Q99676 751 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUSP21Q9H596 190 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 CKLFQ9UBR5 152 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 DUX4Q9UBX2 424 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 OR14J1Q9UGF5 321 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 RPUSD1Q9UJJ7 312 aaKnown RBP12.48□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF222Q9UK12 451 aa12.48□□□□□ -0.41
CXCL12-207ENST00000488591 PNMA8CA0A1B0GUJ8 204 aa12.47□□□□□ -0.41
CXCL12-207ENST00000488591 ZNF879B4DU55 563 aa12.47□□□□□ -0.41
CXCL12-207ENST00000488591 RGS10O43665 173 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms