RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 MOB1AQ9H8S9 216 aa6.92□□□□□ -1.3
PRKCB-208ENST00000487674 FRRS1LQ9P0K9 344 aa6.92□□□□□ -1.3
PRKCB-208ENST00000487674 TMEM14AQ9Y6G1 99 aa6.92□□□□□ -1.3
PRKCB-208ENST00000487674 NOTCH3Q9UM47 2321 aa6.92□□□□□ -1.3
PRKCB-208ENST00000487674 PQLC2LA1A4F0 135 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 MEGF11A6BM72 1044 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 AQP12BA6NM10 295 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 DHRS7CA6NNS2 312 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 PIN1P1O15428 100 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 SYNGR1O43759 233 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 NOS1APO75052 506 aaPredicted RBP6.91□□□□□ -1.3
PRKCB-208ENST00000487674 FBXO24O75426 580 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 NXPH2O95156 264 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 NRASP01111 189 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 RBP4P02753 201 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 TTRP02766 147 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 MRPL3P09001 348 aaKnown RBP6.91□□□□□ -1.3
PRKCB-208ENST00000487674 ANXA8P13928 327 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 CCL3L1P16619 93 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 MPZP25189 248 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 PAX6P26367 422 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 CEBPDP49716 269 aaPredicted RBP6.91□□□□□ -1.3
PRKCB-208ENST00000487674 HCCSP53701 268 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 MFGE8Q08431 387 aaPredicted RBP6.91□□□□□ -1.3
PRKCB-208ENST00000487674 ZNF273Q14593 569 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 SNAPC1Q16533 368 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 CLVS2Q5SYC1 327 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 BCL2L15Q5TBC7 163 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 TMEM236Q5W0B7 351 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 TMEM42Q69YG0 159 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 HIST2H2BDQ6DRA6 164 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 CALHM1Q8IU99 346 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 AQP12AQ8IXF9 295 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 HS3ST5Q8IZT8 346 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 Q8N2B8 174 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 OR4S1Q8NGB4 309 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 OR4M1Q8NGD0 313 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 PIFOQ8TCI5 191 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 CANT1Q8WVQ1 401 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 PPP1R14AQ96A00 147 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 CNN2Q99439 309 aaKnown RBP6.91□□□□□ -1.3
PRKCB-208ENST00000487674 TTTY10Q9BZA0 68 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 ZNF702PQ9H963 129 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 HES4Q9HCC6 221 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 IKZF2Q9UKS7 526 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.91□□□□□ -1.3
PRKCB-208ENST00000487674 COPS3Q9UNS2 423 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 TCF19Q9Y242 345 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 TBL2Q9Y4P3 447 aaKnown RBP6.91□□□□□ -1.3
PRKCB-208ENST00000487674 DSCAML1Q8TD84 2053 aa6.91□□□□□ -1.3
PRKCB-208ENST00000487674 FAM90A8PA6NJQ4 464 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 C17orf98A8MV24 154 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 ODF3BA8MYP8 253 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 LOC110117498-PIK3R3F6TDL0 507 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 DLGAP1O14490 977 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 XPNPEP2O43895 674 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 SRSF10O75494 262 aaKnown RBP6.9□□□□□ -1.3
PRKCB-208ENST00000487674 TK1P04183 234 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 RPLP1P05386 114 aaKnown RBP6.9□□□□□ -1.3
PRKCB-208ENST00000487674 PIPP12273 146 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-208ENST00000487674 GYS2P54840 703 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 DLX6P56179 175 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 ESRRGP62508 458 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 CNN3Q15417 329 aaKnown RBP6.9□□□□□ -1.3
PRKCB-208ENST00000487674 FAM189A2Q15884 450 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 ZNF782Q6ZMW2 699 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-208ENST00000487674 Q6ZPA2 131 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 LHFPL4Q7Z7J7 247 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 ELMOD2Q8IZ81 293 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 OR13D1Q8NGV5 346 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 OR2T27Q8NH04 317 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 RPS4Y2Q8TD47 263 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 MNTQ99583 582 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 NKX3-1Q99801 234 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-208ENST00000487674 PRRG3Q9BZD7 231 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 PKIBQ9C010 78 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 PAPOLBQ9NRJ5 636 aaKnown RBP6.9□□□□□ -1.3
PRKCB-208ENST00000487674 ABCB10Q9NRK6 738 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 GPR173Q9NS66 373 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 SERTAD4Q9NUC0 356 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 TVP23BQ9NYZ1 205 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 DNAJB9Q9UBS3 223 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 OR14J1Q9UGF5 321 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 PITPNC1Q9UKF7 332 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 GTF2A1LQ9UNN4 478 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 R4GMQ9 66 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 V9GYS6 101 aa6.9□□□□□ -1.3
PRKCB-208ENST00000487674 A6NDX4 124 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 K7N7A8 449 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 ZNF737O75373 536 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 PRB2P02812 416 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-208ENST00000487674 ARG1P05089 322 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 ZNF728P0DKX0 622 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 T-ENOLP0DO92 83 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 CCL1P22362 96 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 PRKACGP22612 351 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 DYNLT3P51808 116 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 CRISP1P54107 249 aa6.89□□□□□ -1.31
PRKCB-208ENST00000487674 CXCR4P61073 352 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms