RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 B4GALT7Q9UBV7 327 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 NCKAP5O14513 1909 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 M0R296 226 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 TPD52L2O43399 206 aaKnown RBP22.69■■□□□ 1.22
HLA-C-208ENST00000487245 SERPINA5P05154 406 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 TMEM225BP0DP42 221 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 B4GALT1P15291 398 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 RAB32Q13637 225 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 DMRTC1Q5HYR2 192 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 CDCP2Q5VXM1 449 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 MAFIPQ8WZ33 124 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 ALKBH3Q96Q83 286 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-208ENST00000487245 OR2H1Q9GZK4 316 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 PRR13Q9NZ81 148 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 VCANP13611 3396 aa22.69■■□□□ 1.22
HLA-C-208ENST00000487245 ABCD4O14678 606 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 DTYMKP23919 212 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 PSG4Q00888 419 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 RPUSD3Q6P087 351 aaKnown RBP22.68■■□□□ 1.22
HLA-C-208ENST00000487245 IL34Q6ZMJ4 242 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 LHFPL2Q6ZUX7 228 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 C6orf201Q7Z4U5 140 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 OR2M7Q8NG81 312 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 WNT5BQ9H1J7 359 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 MMP26Q9NRE1 261 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 PLEKHJ1Q9NW61 149 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 IGKV1D-8A0A087WSZ0 117 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 LNP1A1A4G5 178 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 FARS2O95363 451 aaKnown RBP22.68■■□□□ 1.22
HLA-C-208ENST00000487245 ACKR3P25106 362 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 RBMXP38159 391 aaKnown RBP22.68■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF585AQ6P3V2 769 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 BHLHE23Q8NDY6 225 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 SAT2Q96F10 170 aaPredicted RBP22.68■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF701Q9NV72 531 aaPredicted RBP22.68■■□□□ 1.22
HLA-C-208ENST00000487245 ANXA10Q9UJ72 324 aa22.68■■□□□ 1.22
HLA-C-208ENST00000487245 IGKV3D-15A0A087WSY6 115 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 RBM39Q14498 530 aaKnown RBP22.67■■□□□ 1.22
HLA-C-208ENST00000487245 PABPC1L2AQ5JQF8 200 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 TMEM42Q69YG0 159 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 SPINK14Q6IE38 97 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 OR2AE1Q8NHA4 323 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 AKR7LQ8NHP1 331 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 ADAMTS17Q8TE56 1095 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 TMED6Q8WW62 240 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 LINC00470Q9BZP3 86 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 PCSK5Q92824 1860 aa22.67■■□□□ 1.22
HLA-C-208ENST00000487245 TERTO14746 1132 aaKnown RBP22.66■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF169Q14929 603 aaPredicted RBP22.66■■□□□ 1.22
HLA-C-208ENST00000487245 CLRN3Q8NCR9 226 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 NARS2Q96I59 477 aaKnown RBP22.66■■□□□ 1.22
HLA-C-208ENST00000487245 CNTNAP3BQ96NU0 1288 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF2Q9BSG1 426 aaPredicted RBP22.66■■□□□ 1.22
HLA-C-208ENST00000487245 CNTNAP3Q9BZ76 1288 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 CARHSP1Q9Y2V2 147 aaKnown RBP22.66■■□□□ 1.22
HLA-C-208ENST00000487245 CRYM-AS1A6NIL9 109 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 CD59P13987 128 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 GABRR1P24046 479 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 RBP2P50120 134 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 HGFACQ04756 655 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 RSU1Q15404 277 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 MST1LQ2TV78 715 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 PLA2G2CQ5R387 149 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 SGPP2Q8IWX5 399 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 OR51F2Q8NH61 342 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 TECTBQ96PL2 329 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 FOXJ2Q9P0K8 574 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 LPAR3Q9UBY5 353 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 ATPIF1Q9UII2 106 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 TUBD1Q9UJT1 453 aa22.66■■□□□ 1.22
HLA-C-208ENST00000487245 MSTNO14793 375 aa22.65■■□□□ 1.22
HLA-C-208ENST00000487245 NUPL2O15504 423 aaKnown RBP22.65■■□□□ 1.22
HLA-C-208ENST00000487245 NEURL1O76050 574 aa22.65■■□□□ 1.22
HLA-C-208ENST00000487245 EIF5AL1Q6IS14 154 aaKnown RBP22.65■■□□□ 1.22
HLA-C-208ENST00000487245 SVBPQ8N300 66 aa22.65■■□□□ 1.22
HLA-C-208ENST00000487245 BORCS8Q96FH0 119 aa22.65■■□□□ 1.22
HLA-C-208ENST00000487245 PARPBPQ9NWS1 579 aa22.65■■□□□ 1.22
HLA-C-208ENST00000487245 PURGQ9UJV8 347 aaKnown RBP22.65■■□□□ 1.22
HLA-C-208ENST00000487245 NOSIPQ9Y314 301 aaKnown RBP22.65■■□□□ 1.22
HLA-C-208ENST00000487245 XRCC2O43543 280 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 NRASP01111 189 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 HOXB5P09067 269 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 SKA3Q8IX90 412 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 ABHD3Q8WU67 409 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 SLC39A7Q92504 469 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF845Q96IR2 970 aaPredicted RBP22.64■■□□□ 1.22
HLA-C-208ENST00000487245 SMIM8Q96KF7 97 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 TSNAXQ99598 290 aaKnown RBP22.64■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF703Q9H7S9 590 aaPredicted RBP22.64■■□□□ 1.22
HLA-C-208ENST00000487245 IL36GQ9NZH8 169 aa22.64■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF629Q9UEG4 869 aaPredicted RBP22.64■■□□□ 1.22
HLA-C-208ENST00000487245 FAM230AA0A1W2PPH8 454 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 FAM74A7A6NL05 159 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 SIGLEC5O15389 551 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 MRPL33O75394 65 aaKnown RBP22.64■■□□□ 1.21
HLA-C-208ENST00000487245 ACTL6AO96019 429 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 ZNF708P17019 499 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 PJVKQ0ZLH3 352 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 FAM74A3Q4VXF1 159 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 DHRS11Q6UWP2 260 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms