RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZMAT5Q9UDW3 170 aaKnown RBP11.61□□□□□ -0.55
HMGN1-216ENST00000486741 KLK10O43240 276 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 GSK3AP49840 483 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 SSBP1Q04837 148 aaKnown RBP11.6□□□□□ -0.55
HMGN1-216ENST00000486741 ESPL1Q14674 2120 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 OR8G1Q15617 311 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM268Q5VZI3 342 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 PPP1R32Q7Z5V6 425 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 OR1J1Q8NGS3 322 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM38BQ9NVV0 291 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 FAM206AQ9NX38 181 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 RNF150Q9ULK6 438 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 TRAV39A0A0B4J263 110 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 TRAV20A0A0B4J274 112 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 PPT1P50897 306 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 PRDX4Q13162 271 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 SEZ6L2Q6UXD5 910 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 ARRDC1Q8N5I2 433 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 APOBEC3DQ96AK3 386 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-216ENST00000486741 GNG12Q9UBI6 72 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 GHRLQ9UBU3 117 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 OPN4Q9UHM6 478 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 PPP1R3CQ9UQK1 317 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 B4E171 279 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 CELA3AP09093 270 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 SP9P0CG40 484 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 TSPAN7P41732 249 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 SNTB1Q13884 538 aaKnown RBP11.6□□□□□ -0.55
HMGN1-216ENST00000486741 SNAI3Q3KNW1 292 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 DPPA2Q7Z7J5 298 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 LGI3Q8N145 548 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF808Q8N4W9 903 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-216ENST00000486741 COL4A4P53420 1690 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-216ENST00000486741 RAB27BO00194 218 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 PSG4Q00888 419 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF169Q14929 603 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-216ENST00000486741 MRPL14Q6P1L8 145 aaKnown RBP11.6□□□□□ -0.55
HMGN1-216ENST00000486741 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 GPR27Q9NS67 375 aa11.6□□□□□ -0.55
HMGN1-216ENST00000486741 FER1L5A0AVI2 2057 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 VSTM5A8MXK1 200 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 NKX2-8O15522 239 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 NPIPB7O75200 414 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 FUT3P21217 361 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 MRPS34P82930 218 aaKnown RBP11.59□□□□□ -0.55
HMGN1-216ENST00000486741 AKR1C8PQ5T2L2 129 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 C11orf87Q6NUJ2 197 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 CLEC9AQ6UXN8 241 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 OR2W3Q7Z3T1 314 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 ZFP82Q8N141 532 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM105Q8N8V8 129 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 ADPRHL1Q8NDY3 354 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 C2CD4CQ8TF44 421 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF75AQ96N20 296 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 PECRQ9BY49 303 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 OR2H1Q9GZK4 316 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 GPR160Q9UJ42 338 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 OBSL1O75147 1896 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 TBPP20226 339 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 SLC23A3Q6PIS1 610 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 SKA3Q8IX90 412 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 OR10J5Q8NHC4 309 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 SGK3Q96BR1 496 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 RFPL4AA6NLU0 287 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 RFPL4AL1F8VTS6 287 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 H3BP45 60 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 IGF2P01344 180 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 PNLIPRP3Q17RR3 467 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 TEX30Q5JUR7 227 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 SHEQ5VZ18 495 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM251Q8N6I4 163 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF709Q8N972 641 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 OR5T1Q8NG75 326 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 OR6S1Q8NH40 331 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 FGF11Q92914 225 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 TTTY12Q9BZ98 90 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 AKAP6Q13023 2319 aa11.59□□□□□ -0.55
HMGN1-216ENST00000486741 IGLV3-12A0A075B6K2 115 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 OR2F2O95006 317 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 IRF2P14316 349 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 OR2F1Q13607 317 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 FHL1Q13642 323 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 TIPARPQ7Z3E1 657 aaKnown RBP11.58□□□□□ -0.56
HMGN1-216ENST00000486741 GFI1Q99684 422 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 TIMP4Q99727 224 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 SF3B5Q9BWJ5 86 aaKnown RBP11.58□□□□□ -0.56
HMGN1-216ENST00000486741 SUCNR1Q9BXA5 334 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 GPR87Q9BY21 358 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 VSIG4Q9Y279 399 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 PCNX2A6NKB5 2137 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 LIMK1P53667 647 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 DEFA6Q01524 100 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 SPICQ8N5J4 248 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF441Q8N8Z8 693 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 SARAFQ96BY9 339 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 KIRREL1Q96J84 757 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 LPAR5Q9H1C0 372 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 MED19A0JLT2 244 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms