RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 KLHL40Q2TBA0 621 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 MLIPQ5VWP3 458 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 TTC19Q6DKK2 380 aaPredicted RBP0.82□□□□□ -2.28
VPS50-216ENST00000484954 SLC35D2Q76EJ3 337 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 FA2HQ7L5A8 372 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 LINC00523Q86TU6 105 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 SETD3Q86TU7 594 aaPredicted RBP0.82□□□□□ -2.28
VPS50-216ENST00000484954 OR4A15Q8NGL6 344 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 TCP10LQ8TDR4 215 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 RCN3Q96D15 328 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 SPACA5Q96QH8 159 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 GABRG3Q99928 467 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 BLZF1Q9H2G9 400 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 FBXO44Q9H4M3 255 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 RGCCQ9H4X1 137 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 RDH14Q9HBH5 336 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 ZC4H2Q9NQZ6 224 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 ZNF608Q9ULD9 1512 aaPredicted RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 TRAV8-4A0A0B4J246 113 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 IGHV2OR16-5A0A0B4J2B6 119 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 ZNF701M0R085 212 aaPredicted RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 KDELR3O43731 214 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 GMDSO60547 372 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 UPK1BO75841 260 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 KCNK2O95069 426 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 PTHP01270 115 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 P01737 135 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 CRYGCP07315 174 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 GZMAP12544 262 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 IVDP26440 423 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 PEX19P40855 299 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 ZNF83P51522 516 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 PSMD4P55036 377 aaKnown RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 OR12D2P58182 307 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 ADIGQ0VDE8 80 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 DOC2AQ14183 400 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 LGALSLQ3ZCW2 172 aaPredicted RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 FBXL19-AS1Q494R0 122 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 HHATQ5VTY9 493 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 TCF24Q7RTU0 167 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 OR2W3Q7Z3T1 314 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 VTCN1Q7Z7D3 282 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 PDPNQ86YL7 162 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 LRRC8AQ8IWT6 810 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 SLC7A5P1Q8MH63 180 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 ZNF555Q8NEP9 628 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 OR4D6Q8NGJ1 314 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 FAM57AQ8TBR7 257 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 CACNG8Q8WXS5 425 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 YIPF5Q969M3 257 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 KIAA1143Q96AT1 154 aaPredicted RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 SNF8Q96H20 258 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 NAPGQ99747 312 aaPredicted RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 BCL7BQ9BQE9 202 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 SHCBP1LQ9BZQ2 653 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 IQCGQ9H095 443 aaKnown RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 TDRD3Q9H7E2 651 aaKnown RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 RPRD1BQ9NQG5 326 aaKnown RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 DDX19BQ9UMR2 479 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 TFR2Q9UP52 801 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 KPTNQ9Y664 436 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 ELP1O95163 1332 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 BRD4O60885 1362 aaPredicted RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 JCADQ9P266 1359 aa0.81□□□□□ -2.28
VPS50-216ENST00000484954 FLG2Q5D862 2391 aaPredicted RBP0.81□□□□□ -2.28
VPS50-216ENST00000484954 IGKV1OR2-108A0A075B7D4 117 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 LOC100653049A0A140TA62 436 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 A0A1W2PNM2 257 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 M0R1B8 84 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 NDUFS5O43920 106 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 TRAPPC6AO75865 159 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 KRT34O76011 436 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 PLEKHA8P1O95397 391 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 PTTG1O95997 202 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 SLC35G6P0C7Q6 338 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 SEC11BP0C7V7 166 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 ARL2P36404 184 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 P2RY2P41231 377 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 ERFP50548 548 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 BCAP31P51572 246 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 FOXA1P55317 472 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 ATP5J2P56134 94 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 YWHAEP62258 255 aaKnown RBP0.8□□□□□ -2.28
VPS50-216ENST00000484954 PMVKQ15126 192 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 NDUFAF6Q330K2 333 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 CDNFQ49AH0 187 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 CLEC18BQ6UXF7 455 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 ANGPTL8Q6UXH0 198 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 CLEC19AQ6UXS0 136 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 RNF10Q8N5U6 811 aaKnown RBP0.8□□□□□ -2.28
VPS50-216ENST00000484954 EIF4E3Q8N5X7 224 aaKnown RBP0.8□□□□□ -2.28
VPS50-216ENST00000484954 ZNF321PQ8N8H1 164 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 OR4K2Q8NGD2 314 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 OR8K3Q8NH51 312 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 OR1S1Q8NH92 325 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 ITLN2Q8WWU7 325 aaPredicted RBP0.8□□□□□ -2.28
VPS50-216ENST00000484954 YIPF6Q96EC8 236 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 C20orf166-AS1Q96NR2 134 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 PEBP4Q96S96 227 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 TBL1XR1Q9BZK7 514 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms