RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CNTRLQ7Z7A1 2325 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 SDK2Q58EX2 2172 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 IGKV1-27A0A075B6S5 117 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 TM4SF5O14894 197 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 UMODP07911 640 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 NOVA1P51513 510 aaKnown RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 RRADP55042 308 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 FLI1Q01543 452 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 IAH1Q2TAA2 248 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 RAET1LQ5VY80 246 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 DHRS7BQ6IAN0 325 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 RPUSD3Q6P087 351 aaKnown RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 HAGHLQ6PII5 290 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 TIPARPQ7Z3E1 657 aaKnown RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 CPNE2Q96FN4 548 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-220ENST00000482507 PLEK2Q9NYT0 353 aa12.95□□□□□ -0.34
ATG4B-220ENST00000482507 B4E171 279 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 C9JQL5 133 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 TP53I11O14683 189 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 SPRY1O43609 319 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 SERPINA5P05154 406 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 KLK3P07288 261 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 LIFP15018 202 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 NME2P22392 152 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 NTF4P34130 210 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 TSPAN7P41732 249 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 GUCA1AP43080 201 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 SURF2Q15527 256 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 IL34Q6ZMJ4 242 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 MRPL24Q96A35 216 aaKnown RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 NRIP2Q9BQI9 281 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 FAAP24Q9BTP7 215 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 CNTNAP3Q9BZ76 1288 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 RHOFQ9HBH0 211 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 PLEKHJ1Q9NW61 149 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 C14orf166Q9Y224 244 aaKnown RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 COL27A1Q8IZC6 1860 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 A0A0J9YW62 118 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 NPIPA2E9PIF3 369 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 NPIPA3F8WFD2 350 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 NFYBP25208 207 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 TMEM268Q5VZI3 342 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 LINC00518Q8N0U6 118 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 DYRK2Q92630 601 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 JSRP1Q96MG2 331 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 S100A13Q99584 98 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 TAF9BQ9HBM6 251 aa12.94□□□□□ -0.34
ATG4B-220ENST00000482507 RCC2Q9P258 522 aaKnown RBP12.94□□□□□ -0.34
ATG4B-220ENST00000482507 LOC102723996A0A087X1L8 192 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 TNFSF11O14788 317 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 RRP8O43159 456 aaKnown RBP12.93□□□□□ -0.34
ATG4B-220ENST00000482507 TMEM225BP0DP42 221 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 FKBP2P26885 142 aaKnown RBP12.93□□□□□ -0.34
ATG4B-220ENST00000482507 RBMXP38159 391 aaKnown RBP12.93□□□□□ -0.34
ATG4B-220ENST00000482507 TAF9Q16594 264 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 C20orf196Q8IYI0 205 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 BSCL2Q96G97 398 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-220ENST00000482507 ANGPTL4Q9BY76 406 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 LOC400499M0QZD8 3231 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 NUDT19A8MXV4 375 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 CA11O75493 328 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 TNFSF15O95150 251 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 CRYGSP22914 178 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 OPRM1P35372 400 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 CAV2P51636 162 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 MTCP1P56278 107 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 RPS18P62269 152 aaKnown RBP12.93□□□□□ -0.34
ATG4B-220ENST00000482507 BRICD5Q6PL45 260 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 CLEC9AQ6UXN8 241 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 SULF2Q8IWU5 870 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 IMMP1LQ96LU5 166 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 TAAR9Q96RI9 348 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 SEC11CQ9BY50 192 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 ULBP2Q9BZM5 246 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 C1orf123Q9NWV4 160 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 AK3Q9UIJ7 227 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 ANXA10Q9UJ72 324 aa12.93□□□□□ -0.34
ATG4B-220ENST00000482507 KLF2Q9Y5W3 355 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-220ENST00000482507 A0A087WZY1 265 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 CCDC187A0A096LP49 1063 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 CRYM-AS1A6NIL9 109 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 H7C2Y5 167 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 AGPAT2O15120 278 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 FBXO24O75426 580 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 MED6O75586 246 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 PATE4P0C8F1 98 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 PET100P0DJ07 73 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 COX6A1P12074 109 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 RPL12P30050 165 aaKnown RBP12.92□□□□□ -0.34
ATG4B-220ENST00000482507 CHAF1BQ13112 559 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 SP6Q3SY56 376 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 ZNF468Q5VIY5 522 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-220ENST00000482507 GGNBP1Q5YKI7 109 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 NTNG2Q96CW9 530 aa12.92□□□□□ -0.34
ATG4B-220ENST00000482507 SAT2Q96F10 170 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-220ENST00000482507 MARS2Q96GW9 593 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms