RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IFFO1Q0D2I5 559 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 TMEM69Q5SWH9 247 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 LIN9Q5TKA1 542 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 FAM104BQ5XKR9 115 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
SF3B1-210ENST00000482158 PDPNQ86YL7 162 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 ZFAND1Q8TCF1 268 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 MSANTD3Q96H12 275 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 TSNAXQ99598 290 aaKnown RBP2.79□□□□□ -1.96
SF3B1-210ENST00000482158 LLPHQ9BRT6 129 aaKnown RBP2.79□□□□□ -1.96
SF3B1-210ENST00000482158 C1orf50Q9BV19 199 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 TBL1XR1Q9BZK7 514 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 NSRP1Q9H0G5 558 aaKnown RBP2.79□□□□□ -1.96
SF3B1-210ENST00000482158 DAZ1Q9NQZ3 744 aaKnown RBP2.79□□□□□ -1.96
SF3B1-210ENST00000482158 A0A0J9YYE9 177 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 LOC100506127A0A0U1RQW1 187 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 YKT6O15498 198 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 NIPSNAP2O75323 286 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 IGHV1-46P01743 117 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 TRBC1P01850 177 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 OR5AL1P0C617 328 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 STAG3L2P0CL84 134 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 MPIP34949 423 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 NUP62P37198 522 aaPredicted RBP2.78□□□□□ -1.96
SF3B1-210ENST00000482158 HAAOP46952 286 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 MEF2CQ06413 473 aaPredicted RBP2.78□□□□□ -1.96
SF3B1-210ENST00000482158 ADIGQ0VDE8 80 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 COTL1Q14019 142 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 NDUFAF6Q330K2 333 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 Q3ZCU0 254 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 TTC32Q5I0X7 151 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 DUPD1Q68J44 220 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 SETD3Q86TU7 594 aaPredicted RBP2.78□□□□□ -1.96
SF3B1-210ENST00000482158 SGPP2Q8IWX5 399 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 NDNFQ8TB73 568 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 FAM57AQ8TBR7 257 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 DERL3Q96Q80 235 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 SPACA5Q96QH8 159 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 SEC22CQ9BRL7 303 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 SHANK2-AS3Q9BTD1 123 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 GAL3ST2Q9H3Q3 398 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 IFNKQ9P0W0 207 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 ADAMTSL3P82987 1691 aa2.78□□□□□ -1.96
SF3B1-210ENST00000482158 PLXNB3Q9ULL4 1909 aa2.78□□□□□ -1.97
SF3B1-210ENST00000482158 NPHP4O75161 1426 aaPredicted RBP2.77□□□□□ -1.97
SF3B1-210ENST00000482158 ZSWIM8A7E2V4 1837 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 NID2Q14112 1375 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 UPK1AO00322 258 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 CSTAP01040 98 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 PFN1P07737 140 aaKnown RBP2.77□□□□□ -1.97
SF3B1-210ENST00000482158 HOXB8P17481 243 aaPredicted RBP2.77□□□□□ -1.97
SF3B1-210ENST00000482158 P2RY2P41231 377 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 HTR2BP41595 481 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 BLVRAP53004 296 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 TAS2R60P59551 318 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 FLI1Q01543 452 aaPredicted RBP2.77□□□□□ -1.97
SF3B1-210ENST00000482158 MAPRE2Q15555 327 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 ERICH5Q6P6B1 374 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 FAM131AQ6UXB0 335 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 PRNTQ86SH4 94 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 TCAIMQ8N3R3 496 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 ZNF680Q8NEM1 530 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 DDI1Q8WTU0 396 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 CACNG8Q8WXS5 425 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 CDKL2Q92772 493 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 TNFRSF14Q92956 283 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 MAP1LC3CQ9BXW4 147 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 SPACA1Q9HBV2 294 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 LZTFL1Q9NQ48 299 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 SDHAF3Q9NRP4 125 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 DDIT4Q9NX09 232 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 CFL2Q9Y281 166 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 MIA3Q5JRA6 1907 aa2.77□□□□□ -1.97
SF3B1-210ENST00000482158 PEG3Q9GZU2 1588 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 FAM240AA0A1B0GVK7 77 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 ANKRD20A5PA0PJZ0 165 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 H7C2Y5 167 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 K7ERQ8 282 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 ALOX12BO75342 701 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 ATP5J2P56134 94 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 MYL6P60660 151 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 MRPS15P82914 257 aaKnown RBP2.76□□□□□ -1.97
SF3B1-210ENST00000482158 DYNC1I2Q13409 638 aaKnown RBP2.76□□□□□ -1.97
SF3B1-210ENST00000482158 XRCC4Q13426 336 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 WDR43Q15061 677 aaKnown RBP eCLIP2.76□□□□□ -1.97
SF3B1-210ENST00000482158 CDNFQ49AH0 187 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 CALHM3Q86XJ0 350 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 LRRC8AQ8IWT6 810 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 ZNF565Q8N9K5 539 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 OR4K2Q8NGD2 314 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 ORAOV1Q8WV07 137 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 FAM131CQ96AQ9 280 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 ZBED3Q96IU2 234 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-210ENST00000482158 RNF170Q96K19 258 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 PORCNQ9H237 461 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 VCX3BQ9H321 246 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 STX18Q9P2W9 335 aaKnown RBP2.76□□□□□ -1.97
SF3B1-210ENST00000482158 FLVCR2Q9UPI3 526 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 ORC6Q9Y5N6 252 aa2.76□□□□□ -1.97
SF3B1-210ENST00000482158 IZUMO1RA6ND01 250 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms