RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TSPAN9O75954 239 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 INMTO95050 263 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 CCL3L1P16619 93 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 TGFBR2P37173 567 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 ZNF273Q14593 569 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 C1orf146Q5VVC0 180 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 SLC35E4Q6ICL7 350 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 Q6ZSR3 168 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 CATSPERDQ86XM0 798 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 ZNF561Q8N587 486 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 C11orf42Q8N5U0 333 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 OR5R1Q8NH85 324 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 SSX3Q99909 188 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 WARS2Q9UGM6 360 aaKnown RBP15.11■□□□□ 0.01
CLK1-211ENST00000481641 SIGLEC9Q9Y336 463 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 MEX3AA1L020 520 aaKnown RBP15.1■□□□□ 0.01
CLK1-211ENST00000481641 F8VVB4 439 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 F8VWA3 439 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 KRT8P05787 483 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 PIPP12273 146 aaPredicted RBP15.1■□□□□ 0.01
CLK1-211ENST00000481641 COX7A1P24310 79 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 BMXP51813 675 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 PDLIM3Q53GG5 364 aaPredicted RBP15.1■□□□□ 0.01
CLK1-211ENST00000481641 HIST2H2BDQ6DRA6 164 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 OR10H4Q8NGA5 316 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 PPP1R35Q8TAP8 253 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 RIBC2Q9H4K1 309 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 HES4Q9HCC6 221 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 POLDIP2Q9Y2S7 368 aa15.1■□□□□ 0.01
CLK1-211ENST00000481641 IGKV1-27A0A075B6S5 117 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 METTL15A6NJ78 407 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 TSPAN15O95858 294 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 TK1P04183 234 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 CCL1P22362 96 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 MPZP25189 248 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 HTR1FP30939 366 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 ERVK11-1P61568 191 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 UBE2V2Q15819 145 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 ZNF782Q6ZMW2 699 aaPredicted RBP15.09■□□□□ 0.01
CLK1-211ENST00000481641 MMP27Q9H306 513 aa15.09■□□□□ 0.01
CLK1-211ENST00000481641 TGP01266 2768 aa15.08■□□□□ 0.01
CLK1-211ENST00000481641 SAC3D1A6NKF1 404 aa15.08■□□□□ 0
CLK1-211ENST00000481641 SYT7O43581 403 aa15.08■□□□□ 0
CLK1-211ENST00000481641 OR2T7P0C7T2 308 aa15.08■□□□□ 0
CLK1-211ENST00000481641 COL10A1Q03692 680 aa15.08■□□□□ 0
CLK1-211ENST00000481641 OCLNQ16625 522 aa15.08■□□□□ 0
CLK1-211ENST00000481641 RDH10Q8IZV5 341 aa15.08■□□□□ 0
CLK1-211ENST00000481641 PRSS35Q8N3Z0 413 aa15.08■□□□□ 0
CLK1-211ENST00000481641 UBE2FQ969M7 185 aa15.08■□□□□ 0
CLK1-211ENST00000481641 PKIBQ9C010 78 aa15.08■□□□□ 0
CLK1-211ENST00000481641 MEGF9Q9H1U4 602 aa15.08■□□□□ 0
CLK1-211ENST00000481641 HEXA-AS1Q9H8Q6 139 aa15.08■□□□□ 0
CLK1-211ENST00000481641 USE1Q9NZ43 259 aa15.08■□□□□ 0
CLK1-211ENST00000481641 MTCH1Q9NZJ7 389 aa15.08■□□□□ 0
CLK1-211ENST00000481641 OAZ3Q9UMX2 235 aa15.08■□□□□ 0
CLK1-211ENST00000481641 DHRS7CA6NNS2 312 aa15.07■□□□□ 0
CLK1-211ENST00000481641 ATP6V1E1P36543 226 aa15.07■□□□□ 0
CLK1-211ENST00000481641 IL24Q13007 206 aa15.07■□□□□ 0
CLK1-211ENST00000481641 LRRC75BQ2VPJ9 315 aa15.07■□□□□ 0
CLK1-211ENST00000481641 TP53I3Q53FA7 332 aa15.07■□□□□ 0
CLK1-211ENST00000481641 LHFPL4Q7Z7J7 247 aa15.07■□□□□ 0
CLK1-211ENST00000481641 ASCC1Q8N9N2 400 aaKnown RBP15.07■□□□□ 0
CLK1-211ENST00000481641 FAM110DQ8TAY7 271 aaPredicted RBP15.07■□□□□ 0
CLK1-211ENST00000481641 SLAMF9Q96A28 289 aa15.07■□□□□ 0
CLK1-211ENST00000481641 EME1Q96AY2 570 aa15.07■□□□□ 0
CLK1-211ENST00000481641 GABARAPL3Q9BY60 117 aa15.07■□□□□ 0
CLK1-211ENST00000481641 PLEKHA1Q9HB21 404 aa15.07■□□□□ 0
CLK1-211ENST00000481641 ENOPH1Q9UHY7 261 aa15.07■□□□□ 0
CLK1-211ENST00000481641 SLC7A11Q9UPY5 501 aa15.07■□□□□ 0
CLK1-211ENST00000481641 A0A1W2PPH5 198 aa15.06■□□□□ 0
CLK1-211ENST00000481641 K7N7A8 449 aa15.06■□□□□ 0
CLK1-211ENST00000481641 FCGR1AP12314 374 aa15.06■□□□□ 0
CLK1-211ENST00000481641 GABRA5P31644 462 aa15.06■□□□□ 0
CLK1-211ENST00000481641 KIR3DL2P43630 455 aa15.06■□□□□ 0
CLK1-211ENST00000481641 RASSF2P50749 326 aa15.06■□□□□ 0
CLK1-211ENST00000481641 DLX6P56179 175 aa15.06■□□□□ 0
CLK1-211ENST00000481641 ZNF85Q03923 595 aa15.06■□□□□ 0
CLK1-211ENST00000481641 PLA1AQ53H76 456 aa15.06■□□□□ 0
CLK1-211ENST00000481641 CRIP3Q6Q6R5 217 aa15.06■□□□□ 0
CLK1-211ENST00000481641 DYNAPQ8N1N2 210 aa15.06■□□□□ 0
CLK1-211ENST00000481641 OR8J1Q8NGP2 316 aa15.06■□□□□ 0
CLK1-211ENST00000481641 PIFOQ8TCI5 191 aa15.06■□□□□ 0
CLK1-211ENST00000481641 RNF166Q96A37 237 aaPredicted RBP15.06■□□□□ 0
CLK1-211ENST00000481641 CENPNQ96H22 339 aaPredicted RBP15.06■□□□□ 0
CLK1-211ENST00000481641 ADI1Q9BV57 179 aa15.06■□□□□ 0
CLK1-211ENST00000481641 OSBPL10Q9BXB5 764 aa15.06■□□□□ 0
CLK1-211ENST00000481641 GNG8Q9UK08 70 aa15.06■□□□□ 0
CLK1-211ENST00000481641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.06■□□□□ 0
CLK1-211ENST00000481641 MEGF11A6BM72 1044 aa15.05■□□□□ -0
CLK1-211ENST00000481641 SULT1C4O75897 302 aa15.05■□□□□ -0
CLK1-211ENST00000481641 SLC25A26Q70HW3 274 aa15.05■□□□□ -0
CLK1-211ENST00000481641 CEP19Q96LK0 163 aa15.05■□□□□ -0
CLK1-211ENST00000481641 FAM234AQ9H0X4 552 aa15.05■□□□□ -0
CLK1-211ENST00000481641 IL36RNQ9UBH0 155 aa15.05■□□□□ -0
CLK1-211ENST00000481641 FBLN5Q9UBX5 448 aa15.05■□□□□ -0
CLK1-211ENST00000481641 FOXJ3Q9UPW0 622 aa15.05■□□□□ -0
CLK1-211ENST00000481641 DSCAML1Q8TD84 2053 aa15.05■□□□□ -0
CLK1-211ENST00000481641 TET2Q6N021 2002 aaPredicted RBP15.04■□□□□ -0
CLK1-211ENST00000481641 LOC107986453A0A1B0GWG9 222 aa15.04■□□□□ -0
CLK1-211ENST00000481641 TMEM82A0PJX8 343 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms