RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 COLQQ9Y215 455 aaPredicted RBP10.36□□□□□ -0.75
TRIM27-205ENST00000481474 PTBP1P26599 531 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIM27-205ENST00000481474 ENDOGQ14249 297 aaKnown RBP10.36□□□□□ -0.75
TRIM27-205ENST00000481474 OR13G1Q8NGZ3 307 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 ADAMTS17Q8TE56 1095 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 EID2BQ96D98 161 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 RAX2Q96IS3 184 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 PKMYT1Q99640 499 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 SLAMF8Q9P0V8 285 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 EMDP50402 254 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 C4orf32Q8N8J7 132 aa10.36□□□□□ -0.75
TRIM27-205ENST00000481474 ERRFI1Q9UJM3 462 aaPredicted RBP10.36□□□□□ -0.75
TRIM27-205ENST00000481474 A0A1B0GTH9 108 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 IFITM10A6NMD0 228 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 SFTPCP11686 197 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 CD1EP15812 388 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 HRH1P35367 487 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 NMUP48645 174 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 ZNF56Q15929 161 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 RPUSD3Q6P087 351 aaKnown RBP10.35□□□□□ -0.75
TRIM27-205ENST00000481474 PDPNQ86YL7 162 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 TMEM37Q8WXS4 190 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 OXGR1Q96P68 337 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
TRIM27-205ENST00000481474 HIST1H3AP68431 136 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 KRTCAP3Q53RY4 240 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 NCR3LG1Q68D85 454 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 WFDC12Q8WWY7 111 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 SIGLEC10Q96LC7 697 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 HS3ST3A1Q9Y663 406 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 OR2A25A4D2G3 310 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 PITX3O75364 302 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 HRASP01112 189 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 COX5AP20674 150 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 BCL3P20749 454 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 HTR4Q13639 388 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 C16orf82Q7Z2V1 217 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 OR4D9Q8NGE8 314 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 OR4P4Q8NGL7 312 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 YTHDF1Q9BYJ9 559 aaKnown RBP10.35□□□□□ -0.75
TRIM27-205ENST00000481474 SIRT7Q9NRC8 400 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 KLK4Q9Y5K2 254 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 CSNK1DP48730 415 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 PRB3Q04118 309 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-205ENST00000481474 SHBQ15464 509 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 C1QL3Q5VWW1 255 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 OR10J6PQ8NGY7 276 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 LKAAEAR1Q8TD35 194 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 RTN4IP1Q8WWV3 396 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-205ENST00000481474 RFX2P48378 723 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 IGSF11Q5DX21 431 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 NUFIP2Q7Z417 695 aaKnown RBP10.35□□□□□ -0.75
TRIM27-205ENST00000481474 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 SSMEM1Q8WWF3 244 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 WNT10AQ9GZT5 417 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 S4R3C0 116 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 EPHA8P29322 1005 aaPredicted RBP10.35□□□□□ -0.75
TRIM27-205ENST00000481474 PACRGLQ8N7B6 248 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 FOXB1Q99853 325 aa10.35□□□□□ -0.75
TRIM27-205ENST00000481474 VWDEQ8N2E2 1590 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 FUCA1P04066 466 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 SLC35E2P0CK97 266 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 GALNSP34059 522 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 TOMM34Q15785 309 aaPredicted RBP10.34□□□□□ -0.75
TRIM27-205ENST00000481474 LAMTOR1Q6IAA8 161 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 RHBDD2Q6NTF9 364 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 DPY19L2P2Q6ZN68 376 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 TMEM99Q8N816 258 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 PBOV1Q9GZY1 135 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 LPAR6P43657 344 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 ARRB2P32121 409 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 WNT3P56703 355 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 ZNF154Q13106 437 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 SELENBP1Q13228 472 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 CIB3Q96Q77 187 aaPredicted RBP10.34□□□□□ -0.75
TRIM27-205ENST00000481474 PIK3C2BO00750 1634 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 PRRT4C9JH25 899 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 SOD1P00441 154 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 MT-ATP6P00846 226 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 CD14P08571 375 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 RAB40ALP0C0E4 278 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 NAT2P11245 290 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 SDHAP31040 664 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 AGBL4Q5VU57 503 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 ZNF620Q6ZNG0 422 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 LAX1Q8IWV1 398 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 OR52N4Q8NGI2 321 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 RAB40AQ8WXH6 277 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 NPAS1Q99742 590 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 MAGIXQ9H6Y5 334 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 GDF2Q9UK05 429 aaPredicted RBP10.34□□□□□ -0.75
TRIM27-205ENST00000481474 CORINQ9Y5Q5 1042 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 SNNO75324 88 aaPredicted RBP10.34□□□□□ -0.75
TRIM27-205ENST00000481474 TGFAP01135 160 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 CD68P34810 354 aaPredicted RBP10.34□□□□□ -0.75
TRIM27-205ENST00000481474 CELF2-AS1Q8N7Q2 184 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 SCARB1Q8WTV0 552 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 C1RLQ9NZP8 487 aa10.34□□□□□ -0.75
TRIM27-205ENST00000481474 A0A1B0GUH1 482 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms