RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ANKRD61A6NGH8 418 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 OR5B21A6NL26 309 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 OR2AT4A6NND4 320 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ZNF879B4DU55 563 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ENSAO43768 121 aaKnown RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 NOL3O60936 208 aaKnown RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 IGHA1P01876 353 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 LIMS3P0CW19 117 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 LIMS4P0CW20 117 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 PGA5P0DJD9 388 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ETV1P50549 477 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ERVFRD-1P60508 538 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ADARB1P78563 741 aaKnown RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 KLRD1Q13241 179 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 KCNJ8Q15842 424 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ATPAF1Q5TC12 328 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ZNF691Q5VV52 312 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 MEDAGQ5VYS4 303 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 Q8N7P7 452 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 RGP1Q92546 391 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 FGGYQ96C11 551 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 C12orf43Q96C57 262 aaKnown RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 SPACA5Q96QH8 159 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 NKX3-1Q99801 234 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ABCB9Q9NP78 766 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 ERVK13-1Q9NX77 482 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 CLEC2DQ9UHP7 191 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 RPUSD1Q9UJJ7 312 aaKnown RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 PCDHGB5Q9Y5G0 923 aa9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 SIRT4Q9Y6E7 314 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF1-207ENST00000481260 TRRAPQ9Y4A5 3859 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 CENPVL3A0A0U1RRI6 287 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 A0A1W2PRD5 423 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 A0A1W2PRF3 423 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 A0A1W2PRM7 423 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 DNAJC9-AS1A6NH13 148 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 RFPL4AA6NLU0 287 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 RFPL4AL1F8VTS6 287 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 J3QT63 122 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 MTRF1O75570 445 aaKnown RBP9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 TOX4O94842 621 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 ACAA1P09110 424 aaPredicted RBP9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 NPY4RP50391 375 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 TMBIM6P55061 237 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 UBA52P62987 128 aaKnown RBP9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 GALEQ14376 348 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 DEFB112Q30KQ8 113 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 OR2G6Q5TZ20 316 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 ASPHD2Q6ICH7 369 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 FDX2Q6P4F2 183 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 FAM220AQ7Z4H9 259 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 CLVS1Q8IUQ0 354 aaPredicted RBP9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 POC1AQ8NBT0 407 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 LY6G5BQ8NDX9 201 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 TBC1D15Q8TC07 691 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 ZNF418Q8TF45 676 aaPredicted RBP9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 H1FXQ92522 213 aaKnown RBP9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 LHX4Q969G2 390 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 SLAMF9Q96A28 289 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 RFT1Q96AA3 541 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 TMIGD2Q96BF3 282 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 WDFY2Q96P53 400 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 PDCD1LG2Q9BQ51 273 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 BCL7BQ9BQE9 202 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 NRIP2Q9BQI9 281 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 ADI1Q9BV57 179 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 SIRT7Q9NRC8 400 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 TNFRSF19Q9NS68 423 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 MTCH1Q9NZJ7 389 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 ONECUT1Q9UBC0 465 aa9.39□□□□□ -0.91
RAPGEF1-207ENST00000481260 NBEAL1Q6ZS30 2694 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 H0YAE9 185 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 SIGLEC5O15389 551 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 NDUFB3O43676 98 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 NDUFA2O43678 99 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 LALBAP00709 142 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 HTR1AP08908 422 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 CPT2P23786 658 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 MPZP25189 248 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 NPBWR2P48146 333 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 ERVK11-1P61568 191 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 ACTC1P68032 377 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 ACTA1P68133 377 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 ALKBH1Q13686 389 aaKnown RBP9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 VMO1Q7Z5L0 202 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 DCTN5Q9BTE1 182 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 SUCNR1Q9BXA5 334 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 CHST5Q9GZS9 411 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 MS4A7Q9GZW8 240 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 HES4Q9HCC6 221 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 TRIM36Q9NQ86 728 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 C19orf12Q9NSK7 152 aa9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 MRPS18AQ9NVS2 196 aaKnown RBP9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 SLC25A10Q9UBX3 287 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF1-207ENST00000481260 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
RAPGEF1-207ENST00000481260 IGKV1-12A0A0C4DH73 117 aa9.37□□□□□ -0.91
RAPGEF1-207ENST00000481260 NKX6-3A6NJ46 265 aa9.37□□□□□ -0.91
RAPGEF1-207ENST00000481260 DHRS7CA6NNS2 312 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms