RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 PPIAL4EA0A075B759 164 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 IGHV3OR15-7A0A075B7D8 119 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 TRBV5-7A0A0A0MS05 114 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 ANKRD61A6NGH8 418 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 KIAA1324LA8MWY0 1029 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PPIAL4DF5H284 164 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 MAGEB3O15480 346 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 DHRS3O75911 302 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 CLPXO76031 633 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 LHBP01229 141 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 OCMP0CE72 109 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PPIAL4FP0DN26 164 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 MDH2P40926 338 aaKnown RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 SOX2P48431 317 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 DVL1P1P54792 670 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 RIPPLY1Q0D2K3 151 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 TMEM155Q4W5P6 130 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 GLT8D1Q68CQ7 371 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 SFRP4Q6FHJ7 346 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 C1orf229Q6ZS94 237 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 Q6ZSR3 168 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PEG10Q86TG7 708 aaKnown RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 CDH26Q8IXH8 852 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PARP16Q8N5Y8 322 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 NKAIN3Q8N8D7 197 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 SEMA6DQ8NFY4 1073 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 OR10AC1Q8NH08 325 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 MCFD2Q8NI22 146 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 ERGIC1Q969X5 290 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 TMEM186Q96B77 213 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 TECTBQ96PL2 329 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 TLNRD1Q9H1K6 362 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 FN3KRPQ9HA64 309 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PATZ1Q9HBE1 687 aaKnown RBP10.22□□□□□ -0.77
PTPRF-213ENST00000481019 TMEM160Q9NX00 188 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 RNF7Q9UBF6 113 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PIGLQ9Y2B2 252 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PPIAL4AQ9Y536 164 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 PEX16Q9Y5Y5 336 aa10.22□□□□□ -0.77
PTPRF-213ENST00000481019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF816-ZNF321PA0A0X1KG74 233 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 A0A1B0GW55 424 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 A6NLC8 198 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 LRRC30A6NM36 301 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 ANXA2P2A6NMY6 339 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 NOTOA8MTQ0 251 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 TRAPPC2LH3BP13 241 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 IFNL4K9M1U5 179 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 TNFRSF13BO14836 293 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-213ENST00000481019 PHF1O43189 567 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-213ENST00000481019 ALX3O95076 343 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 TFF1P04155 84 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 WNT2P09544 360 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4L2P0CJ85 424 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4L3P0CJ86 424 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4L4P0CJ87 422 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4L5P0CJ88 424 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4L6P0CJ89 424 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4L7P0CJ90 424 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 FSTP19883 344 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 GPM6AP51674 278 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4L9Q6RFH8 374 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-213ENST00000481019 WDR82Q6UXN9 313 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 MOB3CQ70IA8 216 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 SPERTQ8NA61 448 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 OR11L1Q8NGX0 322 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 OR51F2Q8NH61 342 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 RAB39BQ96DA2 213 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 RNF170Q96K19 258 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 MMP26Q9NRE1 261 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 GPR173Q9NS66 373 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 C14orf119Q9NWQ9 140 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 CTSZQ9UBR2 303 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 DUX4Q9UBX2 424 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 ADAM30Q9UKF2 790 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 NOP16Q9Y3C1 178 aaKnown RBP10.21□□□□□ -0.77
PTPRF-213ENST00000481019 MPC1Q9Y5U8 109 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 V9GY05 133 aa10.21□□□□□ -0.77
PTPRF-213ENST00000481019 ATRQ13535 2644 aa10.21□□□□□ -0.78
PTPRF-213ENST00000481019 CDIPTO14735 213 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 RHBDL1O75783 438 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 RAB3AP20336 220 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 SCAND1P57086 179 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 GMFBP60983 142 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 MXD1Q05195 221 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 FAM76BQ5HYJ3 339 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 TMEM42Q69YG0 159 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 ZNF841Q6ZN19 808 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 UTS2BQ765I0 119 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 GLCCI1Q86VQ1 547 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 FAM90A1Q86YD7 464 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 ZDHHC23Q8IYP9 409 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 FGFRL1Q8N441 504 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 SPICQ8N5J4 248 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 SCCPDHQ8NBX0 429 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 LRRC29Q8WV35 223 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 S100ZQ8WXG8 99 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 RGP1Q92546 391 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms