RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SFRP4Q6FHJ7 346 aaPredicted RBP9.41□□□□□ -0.9
CLDN11-205ENST00000480067 CRIP3Q6Q6R5 217 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 SLC16A12Q6ZSM3 486 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 Q8IYB0 196 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 POC1AQ8NBT0 407 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 DEFB108BQ8NET1 73 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 PXT1Q8NFP0 134 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 RAB2BQ8WUD1 216 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 ZNF488Q96MN9 340 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 METTL9Q9H1A3 318 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 WDR13Q9H1Z4 485 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 PCDHB16Q9NRJ7 776 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 RASL12Q9NYN1 266 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 DNAJB11Q9UBS4 358 aa9.41□□□□□ -0.9
CLDN11-205ENST00000480067 MRPS28Q9Y2Q9 187 aaKnown RBP9.41□□□□□ -0.9
CLDN11-205ENST00000480067 OTOGQ6ZRI0 2925 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 TRAV38-1A0A0B4J264 116 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 ISPDA4D126 451 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 CCDC160A6NGH7 325 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 OOEPA6NGQ2 149 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 WNT9BO14905 357 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 CD37P11049 281 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 MUC1P15941 1255 aaPredicted RBP9.4□□□□□ -0.9
CLDN11-205ENST00000480067 HTR2CP28335 458 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 RANBP1P43487 201 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 NPBWR2P48146 333 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 TMBIM6P55061 237 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 OR10A3P58181 314 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 NCS1P62166 190 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 KCNJ8Q15842 424 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 AVPI1Q5T686 147 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 AWAT2Q6E213 333 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 GLIPR1L1Q6UWM5 242 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 DNM1P46Q6ZS02 220 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 C1QL2Q7Z5L3 287 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 LYPD6Q86Y78 171 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 BATF2Q8N1L9 274 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 C19orf18Q8NEA5 215 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 OR4D6Q8NGJ1 314 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 GFI1Q99684 422 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 BPESC1Q9GZL8 116 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 RHOFQ9HBH0 211 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 WIPI2Q9Y4P8 454 aa9.4□□□□□ -0.9
CLDN11-205ENST00000480067 IGHV4-30-2A0A087WSY4 118 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 SMIM30A4D0T7 59 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 IFITM5A6NNB3 132 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 NOTOA8MTQ0 251 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 LGALS8O00214 317 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 SLC17A2O00624 439 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 SLC22A1O15245 554 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 ZNF780AO75290 641 aaPredicted RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 FSTL3O95633 263 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 CSTBP04080 98 aaKnown RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 EGR1P18146 543 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 BCL3P20749 454 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 CD80P33681 288 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 TGFBR1P36897 503 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 MDH2P40926 338 aaKnown RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 NR4A2P43354 598 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 BMXP51813 675 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 ERVK11-1P61568 191 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 GPR176Q14439 515 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 ZMYND11Q15326 602 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 RAB11BQ15907 218 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 SMIM21Q3B7S5 101 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 SLC22A6Q4U2R8 563 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 C1orf100Q5SVJ3 147 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 FIP1L1Q6UN15 594 aaKnown RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 ASCL4Q6XD76 172 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 LRRC28Q86X40 367 aaPredicted RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 OR5T2Q8NGG2 359 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 OR6M1Q8NGM8 313 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 EMG1Q92979 244 aaKnown RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 C12orf43Q96C57 262 aaKnown RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 Q96MF0 132 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 TMEM165Q9HC07 324 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 RBFOX1Q9NWB1 397 aaKnown RBP9.39□□□□□ -0.91
CLDN11-205ENST00000480067 GHRLQ9UBU3 117 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 DYSFO75923 2080 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 AKAP9Q99996 3911 aa9.39□□□□□ -0.91
CLDN11-205ENST00000480067 IGHV3OR15-7A0A075B7D8 119 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 F8VVB4 439 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 F8VWA3 439 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.38□□□□□ -0.91
CLDN11-205ENST00000480067 NDUFA2O43678 99 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 KDM4BO94953 1096 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 HTR3BO95264 441 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 IL1AP01583 271 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 IGHV2-70P01814 119 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 SFTPBP07988 381 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 CLEC2LP0C7M8 214 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 UBBP0CG47 229 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 CALCBP10092 127 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 ARSBP15848 533 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 SLC25A16P16260 332 aa9.38□□□□□ -0.91
CLDN11-205ENST00000480067 RPS19P39019 145 aaKnown RBP9.38□□□□□ -0.91
CLDN11-205ENST00000480067 SERPINB10P48595 397 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms