RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 TUBD1Q9UJT1 453 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 C14orf166Q9Y224 244 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 CACNA1EQ15878 2313 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 SCRG1O75711 98 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 FBP1P09467 338 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 APOBEC1P41238 236 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 CAMLGP49069 296 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 RPS23P62266 143 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 OR2B11Q5JQS5 317 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 PRAMEF20Q5VT98 475 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 FAM89BQ8N5H3 189 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 HSD17B11Q8NBQ5 300 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 SSC4DQ8WTU2 575 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 DNASE2BQ8WZ79 361 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 ST8SIA1Q92185 356 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 URM1Q9BTM9 101 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 TGIF2Q9GZN2 237 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 ZDHHC8Q9ULC8 765 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 SHANK1Q9Y566 2161 aa11.64□□□□□ -0.55
PDZRN3-208ENST00000479530 VSTM2BA6NLU5 285 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 STMND1H3BQB6 276 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 HTR5AP47898 357 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 UCP2P55851 309 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 TAS2R46P59540 309 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 KISS1Q15726 138 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 PLPPR5Q32ZL2 321 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 PYY3Q5JQD4 70 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 RPUSD3Q6P087 351 aaKnown RBP11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 SULF2Q8IWU5 870 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 MRPL13Q9BYD1 178 aaKnown RBP11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 C19orf12Q9NSK7 152 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 PPP4R1LQ9P1A2 415 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 MMP24Q9Y5R2 645 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 PUS1Q9Y606 427 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 LY6G6EA0A0G2JKS1 128 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 ZNF84P51523 738 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 NHLH2Q02577 135 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 JSRP1Q96MG2 331 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 ARV1Q9H2C2 271 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 U3KQA8 63 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 RALGAPA1Q6GYQ0 2036 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 FRYQ5TBA9 3013 aa11.63□□□□□ -0.55
PDZRN3-208ENST00000479530 ZNF727A8MUV8 499 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 LY86O95711 162 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 PRH1P02810 166 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 RRADP55042 308 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 PLXDC2Q6UX71 529 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 OR1J1Q8NGS3 322 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 HPSE2Q8WWQ2 592 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 DDIT4LQ96D03 193 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 YPEL4Q96NS1 127 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 TMPRSS5Q9H3S3 457 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 METTL7AQ9H8H3 244 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 ELL3Q9HB65 397 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 PNRC2Q9NPJ4 139 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 MYOTQ9UBF9 498 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 HDGFL3Q9Y3E1 203 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 GPR37O15354 613 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 GABRR1P24046 479 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 CCL20P78556 96 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 SGPP2Q8IWX5 399 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 WDSUB1Q8N9V3 476 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 LYZL4Q96KX0 146 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 KCNJ16Q9NPI9 418 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 OCIAD1Q9NX40 245 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 IGHV5-10-1A0A0J9YXX1 117 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 CRYM-AS1A6NIL9 109 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 G3V3Y1 287 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 K7ESF4 209 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 KLK3P07288 261 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 SLC35A1P78382 337 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 UBE2V2Q15819 145 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 CPEB2Q7Z5Q1 589 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 OR52M1Q8NGK5 317 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 TOMM40LQ969M1 308 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 MALSU1Q96EH3 234 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 ABHD14AQ9BUJ0 271 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 TOLLIPQ9H0E2 274 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 LUZP4Q9P127 313 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 KLHL13Q9P2N7 655 aa11.62□□□□□ -0.55
PDZRN3-208ENST00000479530 ATXN7O15265 892 aaPredicted RBP11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 OR2C1O95371 312 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 SEC11BP0C7V7 166 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 LMO1P25800 156 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 RPS10P46783 165 aaKnown RBP11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 NOVA1P51513 510 aaKnown RBP11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 GABREP78334 506 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 CLINT1Q14677 625 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 ZNF343Q6P1L6 599 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 CARFQ8N187 725 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 OR2AJ1Q8NGZ0 328 aa11.61□□□□□ -0.55
PDZRN3-208ENST00000479530 OR14K1Q8NGZ2 314 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms