RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.65■□□□□ 0.58
SDF4-206ENST00000478938 SLC7A11Q9UPY5 501 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 GLI4P10075 376 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 LYZL2Q7Z4W2 148 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 MAML2Q8IZL2 1156 aaPredicted RBP18.64■□□□□ 0.57
SDF4-206ENST00000478938 ADAT3Q96EY9 351 aaPredicted RBP18.64■□□□□ 0.57
SDF4-206ENST00000478938 PARD6GQ9BYG4 376 aaPredicted RBP18.64■□□□□ 0.57
SDF4-206ENST00000478938 SDF2L1Q9HCN8 221 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 G6PC2Q9NQR9 355 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 FREM3P0C091 2139 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 NKX6-3A6NJ46 265 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 C11orf98E9PRG8 122 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 AQP7O14520 342 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 MPZL1O95297 269 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 CSTAP01040 98 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 PEBP1P30086 187 aaKnown RBP18.64■□□□□ 0.57
SDF4-206ENST00000478938 S100A7P31151 101 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 RUNX1Q01196 453 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 KCTD18Q6PI47 426 aaPredicted RBP18.64■□□□□ 0.57
SDF4-206ENST00000478938 TOMM20LQ6UXN7 152 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 OR52R1Q8NGF1 315 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 PCGF1Q9BSM1 259 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 R4GMQ9 66 aa18.64■□□□□ 0.57
SDF4-206ENST00000478938 BGLAPP02818 100 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 PFN1P07737 140 aaKnown RBP18.63■□□□□ 0.57
SDF4-206ENST00000478938 HSD11B1P28845 292 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 C16orf82Q7Z2V1 217 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 LMF2Q9BU23 707 aaKnown RBP18.63■□□□□ 0.57
SDF4-206ENST00000478938 GPR35Q9HC97 309 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 GPR84Q9NQS5 396 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 TRBV11-1A0A0K0K1C0 115 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 FAM24AA6NFZ4 105 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 SLC16A7O60669 478 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 SRSF10O75494 262 aaKnown RBP18.63■□□□□ 0.57
SDF4-206ENST00000478938 H2BFMP0C1H6 154 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 ASAH2BP0C7U1 165 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 PRICKLE4Q2TBC4 344 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 PAM16Q9Y3D7 125 aa18.63■□□□□ 0.57
SDF4-206ENST00000478938 ZFP92A6NM28 416 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 SCDO00767 359 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 NKX2-2O95096 273 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 PSG6Q00889 435 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 GLIPR1L1Q6UWM5 242 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 DGAT2L6Q6ZPD8 337 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 FBXL14Q8N1E6 418 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 OR5L2Q8NGL0 311 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 OR14L1PQ8NHC6 308 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 MS4A10Q96PG2 267 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 OR1A2Q9Y585 309 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 CRYM-AS1A6NIL9 109 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 CST5P28325 142 aaPredicted RBP18.62■□□□□ 0.57
SDF4-206ENST00000478938 MGAT2Q10469 447 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 MPV17LQ2QL34 196 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 C20orf144Q9BQM9 153 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 VN1R3Q9BXE9 311 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 FOXQ1Q9C009 403 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 RNF150Q9ULK6 438 aa18.62■□□□□ 0.57
SDF4-206ENST00000478938 CXorf51AA0A1B0GTR3 108 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 NDUFB8O95169 186 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 FKBP1BP68106 108 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 FOXK1P85037 733 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 VHLLQ6RSH7 139 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 FBXW12Q6X9E4 464 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 IL22RA1Q8N6P7 574 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 TMEM171Q8WVE6 324 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 IL22RA2Q969J5 263 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 RBMXL1Q96E39 390 aaKnown RBP18.61■□□□□ 0.57
SDF4-206ENST00000478938 BOD1Q96IK1 185 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 NUDT16L1Q9BRJ7 211 aaKnown RBP18.61■□□□□ 0.57
SDF4-206ENST00000478938 PYGO2Q9BRQ0 406 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 AURKAIP1Q9NWT8 199 aaPredicted RBP18.61■□□□□ 0.57
SDF4-206ENST00000478938 LRIT1Q9P2V4 623 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 DAPP1Q9UN19 280 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 TDGF1P13385 188 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 EGR4Q05215 589 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 CHRFAM7AQ494W8 412 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 EMC4Q5J8M3 183 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 TSPO2Q5TGU0 170 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 TMEM256Q8N2U0 113 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 ADPRHL1Q8NDY3 354 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 OR10S1Q8NGN2 331 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 OR52N5Q8NH56 324 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 SOCS4Q8WXH5 440 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 ZNF2Q9BSG1 426 aaPredicted RBP18.61■□□□□ 0.57
SDF4-206ENST00000478938 CCL26Q9Y258 94 aa18.61■□□□□ 0.57
SDF4-206ENST00000478938 LINC01553A4QN01 128 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 PRSS47A8MTI9 375 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 TNFSF13O75888 250 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 AKR1A1P14550 325 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 TAS2R46P59540 309 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 ENDOGQ14249 297 aaKnown RBP18.6■□□□□ 0.57
SDF4-206ENST00000478938 ADIRFQ15847 76 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 CPEB2Q7Z5Q1 589 aaKnown RBP18.6■□□□□ 0.57
SDF4-206ENST00000478938 SVIPQ8NHG7 77 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 OIT3Q8WWZ8 545 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 ZCCHC14Q8WYQ9 949 aaKnown RBP18.6■□□□□ 0.57
SDF4-206ENST00000478938 SLC35E1Q96K37 410 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 CTDSP1Q9GZU7 261 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 IGKV1D-8A0A087WSZ0 117 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 IGSF23A1L1A6 192 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms