RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ZFP82Q8N141 532 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 ESX1Q8N693 406 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 MARS2Q96GW9 593 aaKnown RBP9.4□□□□□ -0.9
VPS52-217ENST00000478934 NECAB3Q96P71 396 aaPredicted RBP9.4□□□□□ -0.9
VPS52-217ENST00000478934 HES7Q9BYE0 225 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 AK3Q9UIJ7 227 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 LSM5Q9Y4Y9 91 aaKnown RBP9.4□□□□□ -0.9
VPS52-217ENST00000478934 SPENQ96T58 3664 aaKnown RBP9.4□□□□□ -0.91
VPS52-217ENST00000478934 DSPP15924 2871 aaKnown RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 GEMIN2O14893 280 aaKnown RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 VAMP5O95183 116 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 CELA3AP09093 270 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 LPAR6P43657 344 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 AKR1D1P51857 326 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 ZNF92Q03936 586 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 IAH1Q2TAA2 248 aaPredicted RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 CEACAM16Q2WEN9 425 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 PRSS54Q6PEW0 395 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 SLC16A14Q7RTX9 510 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 SLC30A7Q8NEW0 376 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 OR10D3Q8NH80 312 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 C2CD4CQ8TF44 421 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 SPTSSAQ969W0 71 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 NTNG2Q96CW9 530 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 BSCL2Q96G97 398 aaPredicted RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 Q96M66 194 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 SULT4A1Q9BR01 284 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 ZNF629Q9UEG4 869 aaPredicted RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 KNTC1P50748 2209 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 P04436 131 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 CD79AP11912 226 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 MUC1P15941 1255 aaPredicted RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 HTR5AP47898 357 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 ZNF133P52736 654 aaPredicted RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 FOXG1P55316 489 aaPredicted RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 MRPS34P82930 218 aaKnown RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 SCRN3Q0VDG4 424 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 PABPC1L2AQ5JQF8 200 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 AAED1Q7RTV5 226 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 SKA3Q8IX90 412 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 CCDC36Q8IYA8 594 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 OR1F12Q8NHA8 337 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 PP6455Q8WZ26 134 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 EMG1Q92979 244 aaKnown RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 ARL11Q969Q4 196 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 MRPL24Q96A35 216 aaKnown RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 RAB18Q9NP72 206 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 TMEM38BQ9NVV0 291 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 CRIM1Q9NZV1 1036 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 PURGQ9UJV8 347 aaKnown RBP9.39□□□□□ -0.91
VPS52-217ENST00000478934 BDP1A6H8Y1 2624 aa9.39□□□□□ -0.91
VPS52-217ENST00000478934 TRBV6-7A0A0A0MS04 114 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 A0A1B0GV50 99 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 C9JQL5 133 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 MED6O75586 246 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 CSTBP04080 98 aaKnown RBP9.38□□□□□ -0.91
VPS52-217ENST00000478934 PRKACAP17612 351 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 CPT2P23786 658 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 FKBP2P26885 142 aaKnown RBP9.38□□□□□ -0.91
VPS52-217ENST00000478934 RAC3P60763 192 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 RBM39Q14498 530 aaKnown RBP9.38□□□□□ -0.91
VPS52-217ENST00000478934 RSU1Q15404 277 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 Q6ZPA2 131 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 POC1AQ8NBT0 407 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 STOML3Q8TAV4 291 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 TM2D1Q9BX74 207 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 SLC5A7Q9GZV3 580 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 A0A096LPE4 126 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 A0A1W2PPZ6 126 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 LAMTOR5O43504 91 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 XRCC2O43543 280 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 DIRAS3O95661 229 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 ALDH3B1P43353 468 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 ASCL1P50553 236 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 PHLDA2Q53GA4 152 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 ACER2Q5QJU3 275 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 WDR5BQ86VZ2 330 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 SVBPQ8N300 66 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 C2orf50Q96LR7 162 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 CNTNAP3BQ96NU0 1288 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 WNT5BQ9H1J7 359 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 TAF9BQ9HBM6 251 aa9.38□□□□□ -0.91
VPS52-217ENST00000478934 MTRF1O75570 445 aaKnown RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 HKR1P10072 659 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 ZNF708P17019 499 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 CCNOP22674 350 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 CYCSP99999 105 aaKnown RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 ACTBL2Q562R1 376 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 FBXL14Q8N1E6 418 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 CPEB3Q8NE35 698 aaKnown RBP9.37□□□□□ -0.91
VPS52-217ENST00000478934 CT55Q8WUE5 264 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 PIGCQ92535 297 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 GUCD1Q96NT3 240 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 HS3ST6Q96QI5 342 aa9.37□□□□□ -0.91
VPS52-217ENST00000478934 GPHA2Q96T91 129 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms