RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RAD51CO43502 376 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF861PO60384 105 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 BANF1O75531 89 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 KLF7O75840 302 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 ANXA5P08758 320 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC35G6P0C7Q6 338 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC26A3P40879 764 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 TDGF1P3P51864 188 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 CDKN2DP55273 166 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 VSX2P58304 361 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 ATP6V0D1P61421 351 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 C2orf54Q08AI8 447 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 PDIA2Q13087 525 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 KIAA0087Q14695 138 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 TTMPQ5BVD1 217 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 TNFAIP8L3Q5GJ75 292 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 VAX1Q5SQQ9 334 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 FRMPD2BQ6IN97 320 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 AGTRAPQ6RW13 159 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 TMEM205Q6UW68 189 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 SBSNQ6UWP8 590 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 IGFL3Q6UXB1 125 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 CYHR1Q6ZMK1 362 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 VN1R4Q7Z5H5 301 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 RIBC1Q8N443 379 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR10G9Q8NGN4 311 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 NT5CQ8TCD5 201 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 MYDGFQ969H8 173 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 RERGQ96A58 199 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR2A5Q96R48 311 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 NRTNQ99748 197 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 DERL2Q9GZP9 239 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 ING2Q9H160 280 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 EML4Q9HC35 981 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF282Q9UDV7 671 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 NUP50Q9UKX7 468 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 UTP11Q9Y3A2 253 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC25A15Q9Y619 301 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC22A7Q9Y694 548 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 DOPEY1Q5JWR5 2465 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 USP9XQ93008 2570 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 CACNA1DQ01668 2161 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 LRRK2Q5S007 2527 aa2.7□□□□□ -1.98
CDC42BPA-212ENST00000478573 FLNCQ14315 2725 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 IGHV1-45A0A0A0MS14 117 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 GJE1A6NN92 205 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 GOSR2O14653 212 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 ALOX12BO75342 701 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 SCELO95171 688 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 C1QAP02745 245 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 PRB2P02812 416 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 COX6A1P12074 109 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 SERPINB1P30740 379 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 BTCP35070 178 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 PHBP35232 272 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 MAGEA12P43365 314 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 GPR6P46095 362 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 SERPINB8P50452 374 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 SERPINB9P50453 376 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 CCR8P51685 355 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 UGT2B15P54855 530 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 TAS2R39P59534 338 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 RAB10P61026 200 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 STXBP1P61764 594 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 MRPS22P82650 360 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 MRPS25P82663 173 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 TGFBIQ15582 683 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 MLIPQ5VWP3 458 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 RAET1LQ5VY80 246 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 CARD17Q5XLA6 110 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 MBOAT1Q6ZNC8 495 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 ACP7Q6ZNF0 438 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 Q6ZS92 163 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRMT10CQ7L0Y3 403 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 ABHD13Q7L211 337 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 LHFPL3Q86UP9 236 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 B3GNT7Q8NFL0 401 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 FDCSPQ8NFU4 85 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 NPBQ8NG41 125 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR7G2Q8NG99 324 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR4C5Q8NGB2 326 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR11G2Q8NGC1 345 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR1N2Q8NGR9 330 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 RHEBL1Q8TAI7 183 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 FANK1Q8TC84 345 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 EEF1AKMT1Q8WVE0 214 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 WDR34Q96EX3 536 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 CHMP6Q96FZ7 201 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 FAM210AQ96ND0 272 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF317Q96PQ6 595 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 SH3GL3Q99963 347 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 RASL11BQ9BPW5 248 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 AIF1LQ9BQI0 150 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 EFCAB11Q9BUY7 163 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 NUDT9Q9BW91 350 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 TMEM59Q9BXS4 323 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 RACGAP1Q9H0H5 632 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 NANOGQ9H9S0 305 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 ANKHQ9HCJ1 492 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 INPP5EQ9NRR6 644 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms