RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 DKK4Q9UBT3 224 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 SHPKQ9UHJ6 478 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 GLS2Q9UI32 602 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 PILRBQ9UKJ0 227 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 TNFSF18Q9UNG2 199 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CHCHD2Q9Y6H1 151 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 V9GYS6 101 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 NCKAP5O14513 1909 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 COL27A1Q8IZC6 1860 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 F8P00451 2351 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 A0A0A6YYD4 124 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 SPAARA0A1B0GVQ0 90 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 CEACAM18A8MTB9 384 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 A8MXK9 166 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 D6RAR5 112 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 NPIPA2E9PIF3 369 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 NPIPA3F8WFD2 350 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 MFNGO00587 321 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 RER1O15258 196 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 DHHO43323 396 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 RAMP1O60894 148 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 MTRF1O75570 445 aaKnown RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 CRTAPO75718 401 aaPredicted RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 DHRS3O75911 302 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 SPDEFO95238 335 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 HPP00738 406 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PMP2P02689 132 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 GP1BAP07359 652 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 CD63P08962 238 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 FGF2P09038 288 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 COX6A1P12074 109 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 TDGF1P13385 188 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 LIFP15018 202 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 ABOP16442 354 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 GNB3P16520 340 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 FAHP16930 419 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 CDAP32320 146 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 DLSTP36957 453 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 OR3A4PP47883 348 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 SUCLG1P53597 346 aaKnown RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 TAS2R46P59540 309 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 IL13RA1P78552 427 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 H3F3AP84243 136 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 MC2RQ01718 297 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 MFAP5Q13361 173 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 ARFRP1Q13795 201 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 ENDOGQ14249 297 aaKnown RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 INPP5JQ15735 1006 aaPredicted RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 HYAL4Q2M3T9 481 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 CCDC157Q569K6 752 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PRAMEF20Q5VT98 475 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 OR52W1Q6IF63 320 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 ALKAL2Q6UX46 152 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 C17orf107Q6ZR85 190 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 CCDC36Q8IYA8 594 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM123Q8N131 208 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 FAM89BQ8N5H3 189 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 GVQW1Q8N7I0 195 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 INO80EQ8NBZ0 244 aaPredicted RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM185AQ8NFB2 350 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PXT1Q8NFP0 134 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 OR9K2Q8NGE7 335 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 OR5H2Q8NGV7 314 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 OR1S1Q8NH92 325 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 TERB2Q8NHR7 220 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PAQR8Q8TEZ7 354 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PPP1R1CQ8WVI7 109 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PP6455Q8WZ26 134 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 ST8SIA4Q92187 359 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 MR1Q95460 341 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 SPTSSAQ969W0 71 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 MRGPRFQ96AM1 343 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PHYHIPLQ96FC7 376 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM41AQ96HV5 264 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 C1orf147Q96MC9 270 aaPredicted RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 VRK1Q99986 396 aaPredicted RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 SF3B5Q9BWJ5 86 aaKnown RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF416Q9BWM5 594 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 NMES1Q9C002 83 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 DNTTIP1Q9H147 329 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 OR10A2Q9H208 303 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 GAREM1Q9H706 876 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF160Q9HCG1 818 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 RASL12Q9NYN1 266 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 DKKL1Q9UK85 242 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 KCNK7Q9Y2U2 307 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PTRH2Q9Y3E5 179 aaKnown RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 PCDHGA1Q9Y5H4 931 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 FLVCR1Q9Y5Y0 555 aa4.31□□□□□ -1.72
SF3B6-202ENST00000478050 SETD2Q9BYW2 2564 aaPredicted RBP4.31□□□□□ -1.72
SF3B6-202ENST00000478050 DOCK10Q96BY6 2186 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 TRBV6-7A0A0A0MS04 114 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 NSG1A0A0A6YYJ2 146 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 RNF222A6NCQ9 220 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 OR2AT4A6NND4 320 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 DHRS7CA6NNS2 312 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 FOXI3A8MTJ6 420 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SERPINE3A8MV23 424 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 M0R135 149 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms