RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MRPL27Q9P0M9 148 aaKnown RBP11.18□□□□□ -0.62
RTFDC1-207ENST00000477573 M0R296 226 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF735P0CB33 412 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 FUT3P21217 361 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 MSR1P21757 451 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 KHKP50053 298 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 NCBP2P52298 156 aaKnown RBP eCLIP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 OR12D2P58182 307 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 RPTNQ6XPR3 784 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 FAM220AQ7Z4H9 259 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 SYS1Q8N2H4 156 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF433Q8N7K0 673 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 SLC38A9Q8NBW4 561 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 OR4D11Q8NGI4 311 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 FLVCR1-AS1Q8TAF5 88 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 RERGQ96A58 199 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 NOX4Q9NPH5 578 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 C13orf42A0A1B0GVH6 325 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 YPEL1O60688 119 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 CH25HO95992 272 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 CRYGCP07315 174 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 FAHP16930 419 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 CSNK2A2P19784 350 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 CD27P26842 260 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 BUD31P41223 144 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 RAB11AP62491 216 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 BTN3A2P78410 334 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF85Q03923 595 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 FOXF1Q12946 379 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ENDOGQ14249 297 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 DECR1Q16698 335 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF542PQ5EBM4 170 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 TMEM64Q6YI46 380 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 VN1R4Q7Z5H5 301 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 OOSP2Q86WS3 158 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 RBM45Q8IUH3 476 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 NRMQ8IXM6 262 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 OR8S1Q8NH09 359 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 SLC37A2Q8TED4 501 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 TMEM239Q8WW34 195 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 MS4A10Q96PG2 267 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 YPEL2Q96QA6 119 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ZFYVE21Q9BQ24 234 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 TPSD1Q9BZJ3 242 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 CST11Q9H112 138 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 GLIPR2Q9H4G4 154 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 RAB18Q9NP72 206 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 SIRT3Q9NTG7 399 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 HRASLS2Q9NWW9 162 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ELOVL5Q9NYP7 299 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF319Q9P2F9 582 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 WNT16Q9UBV4 365 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 CDV3Q9UKY7 258 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 LRP12Q9Y561 859 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF780BQ9Y6R6 833 aa11.17□□□□□ -0.62
RTFDC1-207ENST00000477573 A0A0J9YY10 115 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 RBFOX3A6NFN3 312 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 AQP7P3A6NL99 342 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 FGF17O60258 216 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 HSPB1P04792 205 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 SRP19P09132 144 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 LGALS7P47929 136 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 TAS2R31P59538 309 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 UBE2NP61088 152 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 HHEXQ03014 270 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 CEBPEQ15744 281 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 SLC48A1Q6P1K1 146 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 CADM4Q8NFZ8 388 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 OR10G4Q8NGN3 311 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 RLN3Q8WXF3 142 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 DVL3Q92997 716 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 KISS1RQ969F8 398 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 TM4SF19Q96DZ7 209 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 SLC35G5Q96KT7 338 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 OR2A5Q96R48 311 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 CABLES2Q9BTV7 478 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 MEGF9Q9H1U4 602 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 SYNPO2LQ9H987 977 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 FUT9Q9Y231 359 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 VSIG4Q9Y279 399 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 C4orf51C9J302 202 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 RAMP3O60896 148 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 RPS4Y1P22090 263 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 EDNRAP25101 427 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 FAM3BP58499 235 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 C5orf64Q2M2E5 130 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 SNAI3Q3KNW1 292 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 DNM1P34Q6PK57 102 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 OR10W1Q8NGF6 305 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 FAM222BQ8WU58 562 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 PATE1Q8WXA2 126 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 ADIPOR1Q96A54 375 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 ALG12Q9BV10 488 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 TMEM121BQ9BXQ6 578 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 ZCCHC3Q9NUD5 404 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 BET1LQ9NYM9 111 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms