RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	C11orf72	Q8NBR9	251 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	OR2Y1	Q8NGV0	311 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	OR5AK3P	Q8NH89	298 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	RXFP2	Q8WXD0	754 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	CCDC127	Q96BQ5	260 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PDCD1LG2	Q9BQ51	273 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	FGF23	Q9GZV9	251 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	TOLLIP	Q9H0E2	274 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	SLC38A1	Q9H2H9	487 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	DIABLO	Q9NR28	239 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	FBXO6	Q9NRD1	293 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	NLE1	Q9NVX2	485 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	C1orf109	Q9NX04	203 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	MAT2B	Q9NZL9	334 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	MARCO	Q9UEW3	520 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PUS1	Q9Y606	427 aa	Known RBP eCLIP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PALLD	Q8WX93	1383 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334		A0A1W2PRG6	482 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	TMEM213	A2RRL7	107 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	LINC01619	G3V211	115 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	MKRN2OS	H3BPM6	223 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	CLDN34	H7C241	214 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334		K7EM74	188 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334		M0R1B8	84 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	DNASE2	O00115	360 aa	Predicted RBP	2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	ITGB1BP1	O14713	200 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	SOCS1	O15524	211 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	REM1	O75628	298 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	S100A6	P06703	90 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	LOX	P28300	417 aa	Predicted RBP	2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	ERF	P50548	548 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	NDUFA8	P51970	172 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	SYNJ2BP	P57105	145 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	UBE2G2	P60604	165 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	CYP24A1	Q07973	514 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	RAB31	Q13636	194 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	GUSBP1	Q15486	140 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	TTC32	Q5I0X7	151 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	DNLZ	Q5SXM8	178 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	IDNK	Q5T6J7	187 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	UGT2A3	Q6UWM9	527 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334		Q6ZSR6	202 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	SLC16A13	Q7RTY0	426 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	DNAAF3	Q8N9W5	541 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	OR51Q1	Q8NH59	317 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	NT5C	Q8TCD5	201 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	RXFP4	Q8TDU9	374 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	PHF10	Q8WUB8	498 aa	Known RBP	2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	NELFB	Q8WX92	580 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	PAIP2	Q9BPZ3	127 aa	Known RBP	2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	SFXN3	Q9BWM7	321 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	ANGPTL4	Q9BY76	406 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	PRORY	Q9H606	182 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	METTL8	Q9H825	291 aa	Known RBP	2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	EXOSC4	Q9NPD3	245 aa	Known RBP	2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	TMEM100	Q9NV29	134 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	EURL	Q9NYK6	297 aa		2.26	□□□□□ -2.05
RBM39-231	ENST00000477334	NPHP4	O75161	1426 aa	Predicted RBP	2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	ELP1	O95163	1332 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	ABCB11	O95342	1321 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	MYO3B	Q8WXR4	1341 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	TRAV8-6	A0A0B4J262	113 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334		J3QT63	122 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	UBD	O15205	165 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RAB36	O95755	333 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	PSMB9	P28065	219 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	TEAD1	P28347	426 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RAB38	P57729	211 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	TAS2R31	P59538	309 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RPL23	P62829	140 aa	Known RBP	2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	UBE2I	P63279	158 aa	Known RBP	2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	PRR3	P79522	188 aa	Known RBP	2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	CDK5	Q00535	292 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	LAMTOR4	Q0VGL1	99 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RBMY1F	Q15415	496 aa	Known RBP	2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	MPV17L2	Q567V2	206 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RBM48	Q5RL73	367 aa	Known RBP	2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	MFSD14C	Q5VZR4	134 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	AP1AR	Q63HQ0	302 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RTL4	Q6ZR62	310 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	FUNDC1	Q8IVP5	155 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	C19orf18	Q8NEA5	215 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	DCAKD	Q8WVC6	231 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	CDS1	Q92903	461 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	METTL26	Q96S19	204 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RBBP8	Q99708	897 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	C20orf144	Q9BQM9	153 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	EMC6	Q9BV81	110 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	TMED9	Q9BVK6	235 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	OR51B5	Q9H339	312 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	ASCL3	Q9NQ33	180 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	C12orf4	Q9NQ89	552 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	CYB5R1	Q9UHQ9	305 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	ANXA10	Q9UJ72	324 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	RAB22A	Q9UL26	194 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF257	Q9Y2Q1	563 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	SIGLEC9	Q9Y336	463 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	ORC6	Q9Y5N6	252 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	USH1C	Q9Y6N9	552 aa		2.25	□□□□□ -2.05
RBM39-231	ENST00000477334	SCN1A	P35498	2009 aa		2.25	□□□□□ -2.05

Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms