RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 UBQLN1Q9UMX0 589 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 TIMM10BQ9Y5J6 103 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 RFNGQ9Y644 331 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 MYH10P35580 1976 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 PTPRFP10586 1907 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ITSN2Q9NZM3 1697 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 MROH1Q8NDA8 1641 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 IQGAP2Q13576 1575 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 ABCC3O15438 1527 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 MAPKBP1O60336 1514 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PLA2R1Q13018 1463 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 CDK12Q9NYV4 1490 aaPredicted RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 SSH2Q76I76 1423 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PALLDQ8WX93 1383 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 MYH4Q9Y623 1939 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 IGHV3OR16-10A0A075B7F0 116 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TRAV30A0A087WSZ9 112 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TRAV39A0A0B4J263 110 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 A0A0J9YY10 115 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 A0A1B0GX78 115 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 A0A1W2PPK0 400 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TVP23AA6NH52 213 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 ZNF726A6NNF4 738 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 EFCAB9A8MZ26 197 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PRSS46E5RG02 174 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 LMO7DNF2Z398 122 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 F5H6K3 240 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 RPL36A-HNRNPH2H7BZ11 118 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 CORTO00230 105 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 ARPC1BO15143 372 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 ORC5O43913 435 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 HSBP1O75506 76 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PIAS1O75925 651 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TYMSP04818 313 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 APODP05090 189 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 CRYBA1P05813 215 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 HPNP05981 417 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 MPC1LP0DKB6 136 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 OR13C7P0DN81 318 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 GP9P14770 177 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TAC1P20366 129 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PVALBP20472 110 aaPredicted RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 FGF7P21781 194 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 KDELR1P24390 212 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 RPS12P25398 132 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 LOXP28300 417 aaPredicted RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 CD1CP29017 333 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 NTSP30990 170 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 BRS3P32247 399 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 GPR1P46091 355 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 XCR1P46094 333 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SGSHP51688 502 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TAS2R43P59537 309 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 UBE2MP61081 183 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 SNRPEP62304 92 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 RHOBP62745 196 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 DCDP81605 110 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 MRPS10P82664 201 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 CDK6Q00534 326 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 MXD1Q05195 221 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 BAXQ07812 192 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PLCXD2Q0VAA5 305 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PLA2G7Q13093 441 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 RAB35Q15286 201 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 ACKR1Q16570 336 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TBC1D28Q2M2D7 210 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 ARHGAP11BQ3KRB8 267 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TTLL9Q3SXZ7 439 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 CCSMST1Q4G0I0 132 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 HIGD2BQ4VC39 106 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 UNC50Q53HI1 259 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 TMEM97Q5BJF2 176 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 NHLRC3Q5JS37 347 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 CPTPQ5TA50 214 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 LAMTOR1Q6IAA8 161 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 STEAP1BQ6NZ63 245 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 WDR82Q6UXN9 313 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 ZNF841Q6ZN19 808 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 C19orf35Q6ZS72 473 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 MBOAT2Q6ZWT7 520 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SSX6Q7RTT6 188 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 ANKRD33Q7Z3H0 272 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 FAM19A5Q7Z5A7 132 aaPredicted RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 FAM19A1Q7Z5A9 133 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PIGZQ86VD9 579 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 MARCH9Q86YJ5 346 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 PDZD9Q8IXQ8 264 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 DND1Q8IYX4 353 aaKnown RBP2.02□□□□□ -2.09
XRN1-211ENST00000477237 BLIDQ8IZY5 108 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 JAGN1Q8N5M9 183 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 KIR3DL3Q8N743 410 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 CHST4Q8NCG5 386 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 OR4D11Q8NGI4 311 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 OR52I1Q8NGK6 324 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 OR10G9Q8NGN4 311 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 RPLP0P6Q8NHW5 317 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SPPL2BQ8TCT7 592 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SLC7A13Q8TCU3 470 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 Q8WTZ3 238 aa2.02□□□□□ -2.09
XRN1-211ENST00000477237 SMAP2Q8WU79 429 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms