RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 OR52A1Q9UKL2 312 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 IKZF2Q9UKS7 526 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 FOXJ3Q9UPW0 622 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 CAB39Q9Y376 341 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-207ENST00000475549 R4GMQ9 66 aa5.69□□□□□ -1.5
HDAC3-207ENST00000475549 A0A1W2PQL4 384 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-207ENST00000475549 VGLL3A8MV65 326 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 LOC110117498-PIK3R3F6TDL0 507 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 H3BSH0 61 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 J3QT63 122 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 K7N7A8 449 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 HOXB6P17509 224 aaKnown RBP5.68□□□□□ -1.5
HDAC3-207ENST00000475549 CCL1P22362 96 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 COX7A1P24310 79 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 GABRA5P31644 462 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 ESRRGP62508 458 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 BLMHQ13867 455 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 ATP6AP1Q15904 470 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 AANATQ16613 207 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 ODF4Q2M2E3 257 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF829Q3KNS6 432 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-207ENST00000475549 DNAL1Q4LDG9 190 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF782Q6ZMW2 699 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-207ENST00000475549 Q6ZS46 218 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 RNF144BQ7Z419 303 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 COMMD2Q86X83 199 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF573Q86YE8 665 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 SLC35F2Q8IXU6 374 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 RDH10Q8IZV5 341 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 PRSS35Q8N3Z0 413 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 C11orf44Q8N8P7 122 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 OR51G2Q8NGK0 314 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 OR5D13Q8NGL4 314 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 OR2T27Q8NH04 317 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 UBE2FQ969M7 185 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 CLN6Q9NWW5 311 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 IL36RNQ9UBH0 155 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 TMEM14AQ9Y6G1 99 aa5.68□□□□□ -1.5
HDAC3-207ENST00000475549 DOCK11Q5JSL3 2073 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 IGKV1-9A0A0C4DH69 117 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 TMEM82A0PJX8 343 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 BTBD17A6NE02 478 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 ODF3BA8MYP8 253 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 G3V2T6 193 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 G3V4G9 280 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 SLC1A7O00341 560 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 MMP23AO75900 390 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 INMTO95050 263 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 RPP14O95059 124 aaKnown RBP5.67□□□□□ -1.5
HDAC3-207ENST00000475549 NXPH2O95156 264 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 APOL3O95236 402 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 PIPP12273 146 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-207ENST00000475549 CAPZA1P52907 286 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 ISL1P61371 349 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 COL10A1Q03692 680 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 BNIP1Q12981 228 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 IL24Q13007 206 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 HABP2Q14520 560 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-207ENST00000475549 HERPUD1Q15011 391 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 LRRC75BQ2VPJ9 315 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 SMIM21Q3B7S5 101 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 BCL2L15Q5TBC7 163 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 LCN1P1Q5VSP4 162 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 AMIGO2Q86SJ2 522 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 CATSPERDQ86XM0 798 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 Q8N2B8 174 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 OR11H6Q8NGC7 330 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 OR52N4Q8NGI2 321 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 TRMT10AQ8TBZ6 339 aaKnown RBP5.67□□□□□ -1.5
HDAC3-207ENST00000475549 BCAS4Q8TDM0 211 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 WIPF2Q8TF74 440 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-207ENST00000475549 DNAJC9Q8WXX5 260 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 MNTQ99583 582 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 TBX5Q99593 518 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 CIB1Q99828 191 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 TEX12Q9BXU0 123 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 PKIBQ9C010 78 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 FAM234AQ9H0X4 552 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 HEXA-AS1Q9H8Q6 139 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF702PQ9H963 129 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 SERTAD4Q9NUC0 356 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 H2AFY2Q9P0M6 372 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-207ENST00000475549 OR14J1Q9UGF5 321 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 GTF2A1LQ9UNN4 478 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 SNX5Q9Y5X3 404 aa5.67□□□□□ -1.5
HDAC3-207ENST00000475549 A0A0G2JK05 382 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 FAM230AA0A1W2PPH8 454 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 METTL15A6NJ78 407 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 DHRS7CA6NNS2 312 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF670-ZNF695F2Z2N8 137 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 J3QRE1 110 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 PSPNO60542 156 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 PRB2P02812 416 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-207ENST00000475549 OPN1MWP04001 364 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 CSF1P09603 554 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF728P0DKX0 622 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 OPN1MW2P0DN77 364 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 OPN1MW3P0DN78 364 aa5.66□□□□□ -1.5
HDAC3-207ENST00000475549 CALCBP10092 127 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms