RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PGA4P0DJD7 388 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 PGA5P0DJD9 388 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 KITLGP21583 273 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 PPP2R1BP30154 601 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SRD5A2P31213 254 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 OR3A1P47881 315 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 REG1BP48304 166 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 EFNA3P52797 238 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 RHOAP61586 193 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 PAX5Q02548 391 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 DMRTA1Q5VZB9 504 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 EIF5AL1Q6IS14 154 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 SPRED2Q7Z698 418 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 LGI3Q8N145 548 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 CPEB3Q8NE35 698 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 OR4P4Q8NGL7 312 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SNIP1Q8TAD8 396 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 PPP1R35Q8TAP8 253 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SMARCD2Q92925 531 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 EMG1Q92979 244 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 TVP23CQ96ET8 276 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SEC22AQ96IW7 307 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 NMNAT3Q96T66 252 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ATG101Q9BSB4 218 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SRA1Q9HD15 236 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 FAM212BQ9NTI7 297 aaPredicted RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 NKIRAS2Q9NYR9 191 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TAAR3PQ9P1P4 343 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SLC7A11Q9UPY5 501 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 FARSAQ9Y285 508 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 A0A1W2PQD3 144 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 IGLC7A0M8Q6 106 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TMEM88BA6NKF7 163 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 E5RGE8 158 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 VENTXO95231 258 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 GYPBP06028 91 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 CD2P06729 351 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 AKR1A1P14550 325 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SRP14P37108 136 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 NCBP2P52298 156 aaKnown RBP eCLIP3.54□□□□□ -1.849e-8■■■□□ 15.9
USP16-205ENST00000474835 FAM3BP58499 235 aaPredicted RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 AIMP2Q13155 320 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 FZD2Q14332 565 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 BEX5Q5H9J7 111 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 C10orf120Q5SQS8 335 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 LCNL1Q6ZST4 164 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TIPARPQ7Z3E1 657 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 NRROSQ86YC3 692 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 MUC15Q8N387 334 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 CISD2Q8N5K1 135 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 GATD1Q8NB37 220 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ADPRHL1Q8NDY3 354 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 PLPP5Q8NEB5 264 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 OR5AR1Q8NGP9 310 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 MARCH1Q8TCQ1 289 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ZCCHC14Q8WYQ9 949 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 RBMXL1Q96E39 390 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 C1orf159Q96HA4 380 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ZNF514Q96K75 400 aaPredicted RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 LYZL4Q96KX0 146 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 CHRNA10Q9GZZ6 450 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 HRH4Q9H3N8 390 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 PLK3Q9H4B4 646 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 PATZ1Q9HBE1 687 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 RPS10P5Q9NQ39 176 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ZCCHC3Q9NUD5 404 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 AHSPQ9NZD4 102 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SLC17A4Q9Y2C5 497 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 NSG2Q9Y328 171 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 MED31Q9Y3C7 131 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TRAV18A0A075B6X5 111 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TCRBV21S2A2A0A5A6 115 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 METTL21EPA6NDL7 271 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 IFNL4K9M1U5 179 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ZNF14P17017 642 aaPredicted RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 ZNF28P17035 718 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 PPM1AP35813 382 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 CLDN18P56856 261 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ARF6P62330 175 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 IL13RA1P78552 427 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 LASP1Q14847 261 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 EBPQ15125 230 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 RNASE12Q5GAN4 147 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 SOHLH1Q5JUK2 328 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 ALKBH2Q6NS38 261 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SLC25A47Q6Q0C1 308 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 STPG4Q8N801 248 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 INO80EQ8NBZ0 244 aaPredicted RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 OR2D3Q8NGH3 330 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 OR52E2Q8NGJ4 325 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TSLPQ969D9 159 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 SCAMP4Q969E2 229 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 RASD2Q96D21 266 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 URM1Q9BTM9 101 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 TBL1XR1Q9BZK7 514 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 RTN4RQ9BZR6 473 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 FAM60AQ9NP50 221 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 RXFP3Q9NSD7 469 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TAS2R4Q9NYW5 299 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 GNG8Q9UK08 70 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms