RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, human

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-215	ENST00000474539	SLC7A6	Q92536	515 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	RPUSD4	Q96CM3	377 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	PLPPR2	Q96GM1	343 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	SMIM10	Q96HG1	83 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	SPSB2	Q99619	263 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	G6PC2	Q9NQR9	355 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	SLC35D1	Q9NTN3	355 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	TAS2R4	Q9NYW5	299 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	NSG2	Q9Y328	171 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	GREB1L	Q9C091	1923 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	LOC105371242	A0A075B767	164 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539		A0A1W2PPK0	400 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	FABP7	O15540	132 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	COX7A2P2	O60397	106 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	FCMR	O60667	390 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	MITF	O75030	526 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	BGLAP	P02818	100 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	MYF5	P13349	255 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	EPHA2	P29317	976 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	GGTLC2	Q14390	218 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF260	Q3ZCT1	412 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	C12orf73	Q69YU5	71 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	STUM	Q69YW2	141 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	MRPL14	Q6P1L8	145 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	C9orf40	Q8IXQ3	194 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZFP62	Q8NB50	900 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR8G5	Q8NG78	346 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	TMEM186	Q96B77	213 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	GPX7	Q96SL4	187 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	ARV1	Q9H2C2	271 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	IL36G	Q9NZH8	169 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	SEMA5B	Q9P283	1151 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	PURG	Q9UJV8	347 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	HSPB11	Q9Y547	144 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	TDRD15	B5MCY1	1934 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	MEIOC	A2RUB1	952 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZFP92	A6NM28	416 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539		K7ENP7	123 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	NUPL2	O15504	423 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	HAND1	O96004	215 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	PDGFB	P01127	241 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	IGHM	P01871	453 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	IL7	P13232	177 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	TSPO	P30536	169 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	CYB5R2	Q6BCY4	276 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR4A47	Q6IF82	309 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	MMD2	Q8IY49	270 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	CRIPAK	Q8N1N5	446 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR10V1	Q8NGI7	309 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR6Q1	Q8NGQ2	317 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZFAND2B	Q8WV99	257 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	ARL6	Q9H0F7	186 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	IKZF5	Q9H5V7	419 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	SLC45A2	Q9UMX9	530 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	EXOG	Q9Y2C4	368 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	WIPI2	Q9Y4P8	454 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	LRP12	Q9Y561	859 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	UTRN	P46939	3433 aa		4.07	□□□□□ -1.76
CCNL1-215	ENST00000474539	IGHV3-15	A0A0B4J1V0	119 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TRAV20	A0A0B4J274	112 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	LOC390937	A0A1W2PQ73	354 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	HMX3	A6NHT5	357 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	BOLA2-SMG1P6	H3BVE0	249 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539		M0R1X1	148 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	SS18L1	O75177	396 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	JTB	O76095	146 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	PF4V1	P10720	104 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	GABRA4	P48169	554 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	GPM6A	P51674	278 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CCR6	P51684	374 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	PSG6	Q00889	435 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	COX19	Q49B96	90 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	AARD	Q4LEZ3	155 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF66	Q6ZN08	573 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	SH2D5	Q6ZV89	423 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CXorf67	Q86X51	503 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FAM169B	Q8N8A8	192 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	PXT1	Q8NFP0	134 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	RPL3L	Q92901	407 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	LRRC3B	Q96PB8	259 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	NIPSNAP1	Q9BPW8	284 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	NKX6-2	Q9C056	277 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR51J1	Q9H342	316 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TMEM165	Q9HC07	324 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	BEX4	Q9NWD9	120 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	PEMT	Q9UBM1	199 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	IGHV1-69-2	A0A0G2JMI3	117 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539		J3KTA2	159 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FADS1	O60427	444 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	EFEMP2	O95967	443 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ADRB1	P08588	477 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TRAPPC2	P0DI81	140 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TRAPPC2B	P0DI82	140 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CA6	P23280	308 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CSF2RB	P32927	897 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	GALR1	P47211	349 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	MMP16	P51512	607 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	METAP1	P53582	386 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	NUTF2	P61970	127 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	RAE1	P78406	368 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms