RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 SNU13P55769 128 aaKnown RBP12.78□□□□□ -0.36
SAMM50-203ENST00000474323 SLC35E3Q7Z769 313 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
SAMM50-203ENST00000474323 ZNF524Q96C55 264 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 NIPSNAP3BQ9BS92 247 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 ACTR3CQ9C0K3 210 aaPredicted RBP12.78□□□□□ -0.36
SAMM50-203ENST00000474323 MRPS28Q9Y2Q9 187 aaKnown RBP12.78□□□□□ -0.36
SAMM50-203ENST00000474323 COA3Q9Y2R0 106 aaPredicted RBP12.78□□□□□ -0.36
SAMM50-203ENST00000474323 B4DEV8 164 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 MPZL1O95297 269 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 GPR3P46089 330 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 RND3P61587 244 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 TNFRSF9Q07011 255 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 PLXDC2Q6UX71 529 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 TMEM182Q6ZP80 229 aaPredicted RBP12.78□□□□□ -0.36
SAMM50-203ENST00000474323 ZNF664Q8N3J9 261 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 HSD17B11Q8NBQ5 300 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 MRPL24Q96A35 216 aaKnown RBP12.78□□□□□ -0.36
SAMM50-203ENST00000474323 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 FAM210BQ96KR6 192 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 KIAA1456Q9P272 454 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 CACNA1IQ9P0X4 2223 aa12.78□□□□□ -0.36
SAMM50-203ENST00000474323 A0A1B0GV50 99 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 H0YL77 283 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 SCDO00767 359 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 GZMBP10144 247 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 HNF4GQ14541 408 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 SULF2Q8IWU5 870 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 C1orf147Q96MC9 270 aaPredicted RBP12.77□□□□□ -0.36
SAMM50-203ENST00000474323 GPR27Q9NS67 375 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 CBY1Q9Y3M2 126 aa12.77□□□□□ -0.36
SAMM50-203ENST00000474323 FREM3P0C091 2139 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 NSA2O95478 260 aaKnown RBP12.77□□□□□ -0.37
SAMM50-203ENST00000474323 TTRP02766 147 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 HSPB1P04792 205 aaKnown RBP12.77□□□□□ -0.37
SAMM50-203ENST00000474323 SNRPCP09234 159 aaKnown RBP12.77□□□□□ -0.37
SAMM50-203ENST00000474323 H2BFMP0C1H6 154 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 HAGHQ16775 308 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 GALNTL5Q7Z4T8 443 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 PLPP5Q8NEB5 264 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 SLC37A2Q8TED4 501 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 URM1Q9BTM9 101 aaKnown RBP12.77□□□□□ -0.37
SAMM50-203ENST00000474323 OR10A5Q9H207 317 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.77□□□□□ -0.374e-15■■■■■ 31.4
SAMM50-203ENST00000474323 FAM206AQ9NX38 181 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 ARID1AO14497 2285 aa12.77□□□□□ -0.37
SAMM50-203ENST00000474323 CRYM-AS1A6NIL9 109 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 METTL12A8MUP2 240 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 IGHMP01871 453 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CTSDP07339 412 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-203ENST00000474323 QDPRP09417 244 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CCL20P78556 96 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 IL13RA2Q14627 380 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 C5orf24Q7Z6I8 188 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 SLC26A10Q8NG04 563 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CA5BP1Q8WTZ4 195 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 SLC25A36Q96CQ1 311 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 ZNF845Q96IR2 970 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-203ENST00000474323 LRRC61Q9BV99 259 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 FOXD3Q9UJU5 478 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 MED19A0JLT2 244 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-203ENST00000474323 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CYTIPO60759 359 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
SAMM50-203ENST00000474323 KLK2P20151 261 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 BCKDHBP21953 392 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CD27P26842 260 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 SLC6A8P48029 635 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 SLC10A1Q14973 349 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 TMEM183AQ8IXX5 376 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 BAHD1Q8TBE0 780 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-203ENST00000474323 DGAT2Q96PD7 388 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 DDA1Q9BW61 102 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 BANF2Q9H503 90 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 CENPMQ9NSP4 180 aa12.76□□□□□ -0.37
SAMM50-203ENST00000474323 WDR87Q6ZQQ6 2873 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 NSG1A0A0A6YYJ2 146 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 CDRT15L2A8MXV6 281 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 B4DGG1 531 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 CD38P28907 300 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 BLKP51451 505 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 FUT7Q11130 342 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 RNF133Q8WVZ7 376 aa12.75□□□□□ -0.37
SAMM50-203ENST00000474323 RND2P52198 227 aa12.74□□□□□ -0.37
SAMM50-203ENST00000474323 CEBPGP53567 150 aa12.74□□□□□ -0.37
SAMM50-203ENST00000474323 H3F3AP84243 136 aa12.74□□□□□ -0.37
SAMM50-203ENST00000474323 LINC00346Q8IVM7 164 aa12.74□□□□□ -0.37
SAMM50-203ENST00000474323 FAM89BQ8N5H3 189 aa12.74□□□□□ -0.37
SAMM50-203ENST00000474323 STT3BQ8TCJ2 826 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms