RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PARP16Q8N5Y8 322 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ZFP41Q8N8Y5 198 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 PNLDC1Q8NA58 520 aaKnown RBP11.45□□□□□ -0.58
USF1-205ENST00000473969 NANPQ8TBE9 248 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 POM121Q96HA1 1249 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 ZNF488Q96MN9 340 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 CDCA4Q9BXL8 241 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 RASSF4Q9H2L5 321 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 MMP26Q9NRE1 261 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 CKLFQ9UBR5 152 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 INSIG2Q9Y5U4 225 aa11.45□□□□□ -0.58
USF1-205ENST00000473969 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.582e-8■■■■■ 31.6
USF1-205ENST00000473969 IGKV1-9A0A0C4DH69 117 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 RRP9O43818 475 aaKnown RBP11.44□□□□□ -0.58
USF1-205ENST00000473969 INMTO95050 263 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 ALX3O95076 343 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 LALBAP00709 142 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 LIPFP07098 398 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 CELP19835 753 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 SLC35A2P78381 396 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 BDH1Q02338 343 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 MED22Q15528 200 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 DMKNQ6E0U4 476 aaPredicted RBP11.44□□□□□ -0.58
USF1-205ENST00000473969 ANGPTL6Q8NI99 470 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 RPS4Y2Q8TD47 263 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 THRSPQ92748 146 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 TMEM106AQ96A25 262 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 SLAMF9Q96A28 289 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 GPER1Q99527 375 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 NRIP2Q9BQI9 281 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 TMPRSS13Q9BYE2 586 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 CTSZQ9UBR2 303 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 OR14J1Q9UGF5 321 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 GLS2Q9UI32 602 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 SIRT4Q9Y6E7 314 aaPredicted RBP11.44□□□□□ -0.58
USF1-205ENST00000473969 MALRD1Q5VYJ5 2156 aa11.44□□□□□ -0.58
USF1-205ENST00000473969 IGKV1-27A0A075B6S5 117 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 KIR2DS1A0A191URI9 304 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 RFPL4AA6NLU0 287 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 RFPL4AL1F8VTS6 287 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 SIGLEC5O15389 551 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 CD1AP06126 327 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 PSG2P11465 335 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 NDUFB7P17568 137 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 CRHBPP24387 322 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 PRDX2P32119 198 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 PDZK1IP1Q13113 114 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 SPHARQ15513 63 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 KRTAP21-3Q3LHN1 58 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 Q499Y3 187 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 ARMCX4Q5H9R4 360 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 ZNF788Q6ZQV5 615 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 BTN2A1Q7KYR7 527 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 SATL1Q86VE3 508 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 BATF2Q8N1L9 274 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 ZNF485Q8NCK3 441 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 TMEM185AQ8NFB2 350 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 H1FXQ92522 213 aaKnown RBP11.43□□□□□ -0.58
USF1-205ENST00000473969 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
USF1-205ENST00000473969 RFT1Q96AA3 541 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 DUSP21Q9H596 190 aa11.43□□□□□ -0.58
USF1-205ENST00000473969 SLC25A10Q9UBX3 287 aaPredicted RBP11.43□□□□□ -0.58
USF1-205ENST00000473969 NSD1Q96L73 2696 aaPredicted RBP11.43□□□□□ -0.58
USF1-205ENST00000473969 FN1P02751 2386 aaKnown RBP11.43□□□□□ -0.58
USF1-205ENST00000473969 SONP18583 2426 aaKnown RBP11.43□□□□□ -0.58
USF1-205ENST00000473969 KNG1P01042 644 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 HSMCR30P0CW71 290 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 TMEM225BP0DP42 221 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 MAPK3P27361 379 aaPredicted RBP11.42□□□□□ -0.58
USF1-205ENST00000473969 ACSM1Q08AH1 577 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 PRSS48Q7RTY5 328 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 C1QL2Q7Z5L3 287 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 ZNF561Q8N587 486 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 MS4A15Q8N5U1 240 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 RGP1Q92546 391 aaPredicted RBP11.42□□□□□ -0.58
USF1-205ENST00000473969 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 SPACA5Q96QH8 159 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 S100A13Q99584 98 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 SMURF1Q9HCE7 757 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 PAK1IP1Q9NWT1 392 aaPredicted RBP11.42□□□□□ -0.58
USF1-205ENST00000473969 TAS2R4Q9NYW5 299 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 MTCH1Q9NZJ7 389 aa11.42□□□□□ -0.58
USF1-205ENST00000473969 IGKV1D-17A0A075B6S4 117 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 TRBV5-5A0A0J9YX44 114 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 DENRO43583 198 aaKnown RBP11.41□□□□□ -0.58
USF1-205ENST00000473969 SPRY1O43609 319 aaPredicted RBP11.41□□□□□ -0.58
USF1-205ENST00000473969 CHRM2P08172 466 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 ADRA2CP18825 462 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 FPR2P25090 351 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 BDKRB2P30411 391 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 PAX8Q06710 450 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 KISS1Q15726 138 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 METTL11BQ5VVY1 283 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 SAXO1Q8IYX7 474 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 CMTM4Q8IZR5 234 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 OR5D18Q8NGL1 313 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 OR13C5Q8NGS8 318 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms