RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 TNFRSF13BO14836 293 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 IGHV4-31P0DP07 118 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 GP2P55259 537 aaKnown RBP15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 ZP1P60852 638 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 SMIM21Q3B7S5 101 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 ACP7Q6ZNF0 438 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 BIVMQ86UB2 503 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 DEFB108BQ8NET1 73 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 RFT1Q96AA3 541 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 TCF7L1Q9HCS4 588 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 NLKQ9UBE8 527 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 KAAG1Q9UBP8 84 aa15.87■□□□□ 0.13
CTDSP1-207ENST00000473420 TRDV1A0A1B0GX56 115 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 MEGF11A6BM72 1044 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 TRAPPC2LH3BP13 241 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 SPRY1O43609 319 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 NXPH2O95156 264 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 PLATP00750 562 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 WNT2P09544 360 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 RPS2P15880 293 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 JUNBP17275 347 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 SRMP19623 302 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 ZNF93P35789 620 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 FAM27D1Q5T7N8 215 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 ATPAF1Q5TC12 328 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 STUMQ69YW2 141 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 NLRC3Q7RTR2 1065 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 RNF144BQ7Z419 303 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 PNLDC1Q8NA58 520 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 PXT1Q8NFP0 134 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 OR51F2Q8NH61 342 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 SLAMF9Q96A28 289 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 NEIL1Q96FI4 390 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 ZNF488Q96MN9 340 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 GPER1Q99527 375 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 SLITRK2Q9H156 845 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 ACANP16112 2415 aa15.86■□□□□ 0.13
CTDSP1-207ENST00000473420 F8P00451 2351 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 IGHV3OR15-7A0A075B7D8 119 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 KDM4BO94953 1096 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 GYPAP02724 150 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 MAS1P04201 325 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 GMFBP60983 142 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 SATL1Q86VE3 508 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 OR8B3Q8NGG8 313 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 OR5D18Q8NGL1 313 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 SEH1LQ96EE3 360 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 OR8B2Q96RD0 313 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 SMURF1Q9HCE7 757 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 STUB1Q9UNE7 303 aa15.85■□□□□ 0.13
CTDSP1-207ENST00000473420 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.84■□□□□ 0.135e-8■■■■□ 26.2
CTDSP1-207ENST00000473420 IGKV1-12A0A0C4DH73 117 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 MAGEA13PA6NCF6 341 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 OR2AT4A6NND4 320 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 A8MXK9 166 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 B4DSR2 109 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 FAM157AC9JC47 383 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 CD5LO43866 347 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 IGKV1D-12P01611 117 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 SMIM18P0DKX4 95 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 TMEM225BP0DP42 221 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 KRTAP1-1Q07627 177 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 CYB5R2Q6BCY4 276 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 LYPD2Q6UXB3 125 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 ASCL4Q6XD76 172 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 SLC36A1Q7Z2H8 476 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 LRRTM1Q86UE6 522 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 LYPD6Q86Y78 171 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 LINC01356Q8N9X3 169 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 ANGPTL6Q8NI99 470 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 TNFAIP8L1Q8WVP5 186 aa15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 PPIL3Q9H2H8 161 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-207ENST00000473420 NKX6-3A6NJ46 265 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 ADAM20O43506 726 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 ANGPTL7O43827 346 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 KNG1P01042 644 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 PSG2P11465 335 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 BCL3P20749 454 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 FGF9P31371 208 aaPredicted RBP15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 PTGFRP43088 359 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 NPY4RP50391 375 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 BMXP51813 675 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 ESCO2Q56NI9 601 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 FIP1L1Q6UN15 594 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 ZNF788Q6ZQV5 615 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 EMG1Q92979 244 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 FOXRED1Q96CU9 486 aaPredicted RBP15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 MSI2Q96DH6 328 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 UQCC2Q9BRT2 126 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 MRPS26Q9BYN8 205 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 SEBOXQ9HB31 216 aaPredicted RBP15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 SNTG1Q9NSN8 517 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 ZNF222Q9UK12 451 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 DOCK11Q5JSL3 2073 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 ZANQ9Y493 2812 aa15.83■□□□□ 0.12
CTDSP1-207ENST00000473420 IGKV1D-17A0A075B6S4 117 aa15.82■□□□□ 0.12
CTDSP1-207ENST00000473420 F8VVB4 439 aa15.82■□□□□ 0.12
CTDSP1-207ENST00000473420 F8VWA3 439 aa15.82■□□□□ 0.12
CTDSP1-207ENST00000473420 FOXH1O75593 365 aa15.82■□□□□ 0.12
CTDSP1-207ENST00000473420 MSMBP08118 114 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms