RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 THEM6Q8WUY1 208 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 TFAP2CQ92754 450 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 NIPSNAP1Q9BPW8 284 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 NRIP2Q9BQI9 281 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 OR51V1Q9H2C8 321 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 HES4Q9HCC6 221 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 SPAG4Q9NPE6 437 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 CMC2Q9NRP2 79 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 FAM206AQ9NX38 181 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 RASL12Q9NYN1 266 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 TBL2Q9Y4P3 447 aaKnown RBP7.42□□□□□ -1.22
VCL-204ENST00000472585 A6NIN4 97 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 K7N7A8 449 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 NDUFAB1O14561 156 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 RAMP3O60896 148 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 ZNF737O75373 536 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 KRT36O76013 467 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 APOC1P02654 83 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 LPLP06858 475 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 LYNP07948 512 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 ZNF728P0DKX0 622 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 IGHV1-8P0DP01 117 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 ALOX5APP20292 161 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 MAGEA2P43356 314 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 UTF1Q5T230 341 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 SHFQ7M4L6 423 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 HDXQ7Z353 690 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 FTMTQ8N4E7 242 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 BBS1Q8NFJ9 593 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 OR2T33Q8NG76 320 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 HIST1H2AAQ96QV6 131 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 TEAD3Q99594 435 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 ZNF649Q9BS31 505 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 DGCR6LQ9BY27 220 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 C1orf21Q9H246 121 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 VIPAS39Q9H9C1 493 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 ABCB9Q9NP78 766 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.41□□□□□ -1.22
VCL-204ENST00000472585 NKX1-2Q9UD57 310 aaPredicted RBP7.41□□□□□ -1.22
VCL-204ENST00000472585 OR14J1Q9UGF5 321 aa7.41□□□□□ -1.22
VCL-204ENST00000472585 A0A0U1RQV5 110 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 hCG_1809904A0A1W2PP81 198 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 A0A1W2PPE2 198 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 A0A1W2PPH5 198 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 A0A1W2PR64 198 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 A0A1W2PRV1 198 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 TCRBV5S2A0A599 114 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 TMEM82A0PJX8 343 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 PQLC2LA1A4F0 135 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 RIIAD1A6NNX1 92 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 H0YHG0 523 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 SLC1A7O00341 560 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 CCDC22O60826 627 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 CCNB2O95067 398 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 H2AFXP16104 143 aaPredicted RBP7.4□□□□□ -1.22
VCL-204ENST00000472585 HAAOP46952 286 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 BLVRAP53004 296 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 SLC34A1Q06495 639 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 SNCBQ16143 134 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 MICAQ29983 383 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 TMEM42Q69YG0 159 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 PLBD1Q6P4A8 553 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 ANGPTL5Q86XS5 388 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.4□□□□□ -1.22
VCL-204ENST00000472585 TPRX1Q8N7U7 411 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 OR52N4Q8NGI2 321 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 OR4P4Q8NGL7 312 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 OR13D1Q8NGV5 346 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 OR51E1Q8TCB6 317 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 MCUR1Q96AQ8 359 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 OTULINQ96BN8 352 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 NSMCE2Q96MF7 247 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 CDRT15Q96T59 188 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 CCDC134Q9H6E4 229 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 NIPAL2Q9H841 368 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 GPR84Q9NQS5 396 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 GPR173Q9NS66 373 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 BAIAP2Q9UQB8 552 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 PIGLQ9Y2B2 252 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 U3KQV3 271 aa7.4□□□□□ -1.22
VCL-204ENST00000472585 IGKV1-27A0A075B6S5 117 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 IGHV2-26A0A0B4J1V2 119 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 A0A1B0GTI1 187 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 OR5B21A6NL26 309 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 MAGEB4O15481 346 aaPredicted RBP7.39□□□□□ -1.23
VCL-204ENST00000472585 SRSF10O75494 262 aaKnown RBP7.39□□□□□ -1.23
VCL-204ENST00000472585 NRASP01111 189 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 ZNF3P17036 446 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 ATP6V1B2P21281 511 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 SLC2A5P22732 501 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 MPZP25189 248 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 GDNFP39905 211 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 ACTA2P62736 377 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 ACTG2P63267 376 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 ACTC1P68032 377 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 ACTA1P68133 377 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 MFGE8Q08431 387 aaPredicted RBP7.39□□□□□ -1.23
VCL-204ENST00000472585 RIPPLY1Q0D2K3 151 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 DYNC1I2Q13409 638 aaKnown RBP7.39□□□□□ -1.23
VCL-204ENST00000472585 SMIM21Q3B7S5 101 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms