RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ZNF552Q9H707 407 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 UBE2ZQ9H832 354 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 CSNK1G1Q9HCP0 422 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SH2D2AQ9NP31 389 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MED29Q9NX70 200 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 TREM2Q9NZC2 230 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 TRAV8-7A0A075B6U6 113 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 H3BMH7 237 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MPDU1O75352 247 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 FURINP09958 794 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 GCAP28676 217 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 POLR2IP36954 125 aaKnown RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 LIPAP38571 399 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MEOX2P50222 304 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SLC37A1P57057 533 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 YPEL5P62699 121 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 AGERQ15109 404 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ECSCRQ19T08 205 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 HLA-BQ31612 363 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 PTCRAQ6ISU1 281 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 FAM53AQ6NSI3 398 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 RFESDQ8TAC1 157 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MCHR2Q969V1 340 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 WDR89Q96FK6 387 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 GABRG3Q99928 467 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ASCL3Q9NQ33 180 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 WSB1Q9Y6I7 421 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MBLAC1A4D2B0 266 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 NGFP01138 241 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 HIST1H1EP10412 219 aaKnown RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 CD96P40200 585 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 FUT6P51993 359 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 LRRC26Q2I0M4 334 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 NKAIN4Q8IVV8 208 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 C20orf196Q8IYI0 205 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ADAMTS17Q8TE56 1095 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ASB16Q96NS5 453 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 TEAD3Q99594 435 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 KLF16Q9BXK1 252 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 LOXL2Q9Y4K0 774 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 BCL9O00512 1426 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ATRNO75882 1429 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 COL14A1Q05707 1796 aaKnown RBP6.19□□□□□ -1.42
BRCA1-210ENST00000471181 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 DNAL4O96015 105 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 SBK3P0C264 359 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF735P0CB33 412 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 CEACAM3P40198 252 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 GPNMBQ14956 572 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 IGFBP7Q16270 282 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MORN1Q5T089 497 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 MRGPREQ86SM8 312 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 WDTC1Q8N5D0 677 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 NANOGP1Q8N7R0 232 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 VN1R17PQ8TDU5 208 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 HIST1H4GQ99525 98 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 VN1R1Q9GZP7 353 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 PAM16Q9Y3D7 125 aa6.19□□□□□ -1.42
BRCA1-210ENST00000471181 IGHV3-21A0A0B4J1V1 117 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SMPD2O60906 423 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 TM4SF1P30408 202 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 RPS27P42677 84 aaKnown RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM95Q3KNT9 176 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF324BQ6AW86 544 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 FCRL6Q6DN72 434 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 OR5AU1Q8NGC0 362 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 LKAAEAR1Q8TD35 194 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 RTN4RQ9BZR6 473 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 Q9N2K0 584 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 MMP26Q9NRE1 261 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 A0A1W2PPC4 97 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 MBTPS2O43462 519 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 PDE6DO43924 150 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 PRSS2P07478 247 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ST6GAL1P15907 406 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 FUT7Q11130 342 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SELENBP1Q13228 472 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 PSG5Q15238 335 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 FAM78AQ5JUQ0 283 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SLC48A1Q6P1K1 146 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF383Q8NA42 475 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 OR13H1Q8NG92 308 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 OR5C1Q8NGR4 320 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SCMH1Q96GD3 660 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM101Q96IK0 257 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SLCO1C1Q9NYB5 712 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 M0QZK8 103 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 LANCL1O43813 399 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 PRKNO60260 465 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 GGCTO75223 188 aaKnown RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 LRRC75AQ8NAA5 344 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SYT8Q8NBV8 401 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 P2RX4Q99571 388 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 NPFFR1Q9GZQ6 430 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 S1PR5Q9H228 398 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 TAAR3PQ9P1P4 343 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 C3orf80F5H4A9 247 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SLC17A2O00624 439 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms