RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CPT2P23786 658 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 MAP2K3P46734 347 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 NPY4RP50391 375 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 GPM6AP51674 278 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 CSNK2BP67870 215 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ACTC1P68032 377 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ACTA1P68133 377 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 FAM3AP98173 230 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 PRDX4Q13162 271 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 MAB21L1Q13394 359 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 MPPED2Q15777 294 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 MICBQ29980 383 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 RSPO1Q2MKA7 263 aaPredicted RBP4.77□□□□□ -1.65
VARS-222ENST00000470953 CEP78Q5JTW2 689 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 FAM201AQ5SY85 155 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ZNF684Q5T5D7 378 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 CD276Q5ZPR3 534 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 C12orf73Q69YU5 71 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 KDM4DQ6B0I6 523 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 DUX4L9Q6RFH8 374 aaPredicted RBP4.77□□□□□ -1.65
VARS-222ENST00000470953 SLC36A1Q7Z2H8 476 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 BCDIN3DQ7Z5W3 292 aaKnown RBP4.77□□□□□ -1.65
VARS-222ENST00000470953 ZNF679Q8IYX0 411 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 PLPP7Q8NBV4 271 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 OR8J1Q8NGP2 316 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 Q8TCH9 128 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ST8SIA4Q92187 359 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 EME1Q96AY2 570 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 SGK3Q96BR1 496 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 RNF170Q96K19 258 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 OR8B4Q96RC9 309 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 TEAD3Q99594 435 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 TMEM246Q9BRR3 403 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 C9orf16Q9BUW7 83 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ADI1Q9BV57 179 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 GABARAPL3Q9BY60 117 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 PBOV1Q9GZY1 135 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 MEGF9Q9H1U4 602 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 PPA2Q9H2U2 334 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 EDA2RQ9HAV5 297 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 GPR84Q9NQS5 396 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ACOXLQ9NUZ1 547 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 CLN6Q9NWW5 311 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 DUX4Q9UBX2 424 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 WARS2Q9UGM6 360 aaKnown RBP4.77□□□□□ -1.65
VARS-222ENST00000470953 ENPP5Q9UJA9 477 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 PIGLQ9Y2B2 252 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 RHBDD3Q9Y3P4 386 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 LSM4Q9Y4Z0 139 aaKnown RBP4.77□□□□□ -1.65
VARS-222ENST00000470953 MPC1Q9Y5U8 109 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 PKD1P98161 4303 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 A0A0U1RQV5 110 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 A0A1W2PQ09 198 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ACOD1A6NK06 481 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 OR5B21A6NL26 309 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 C22orf46C9J442 243 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 CDIPTO14735 213 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 NDUFA2O43678 99 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 SLC25A17O43808 307 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 DHRS3O75911 302 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 GYPAP02724 150 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 CHRM2P08172 466 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 VSIG10L2P0DP72 767 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 MMP9P14780 707 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ATP6V1B1P15313 513 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 FAHP16930 419 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 EPHA2P29317 976 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 HTR1FP30939 366 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 TGFBR2P37173 567 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ALDH3A2P51648 485 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 CAPZA1P52907 286 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 HCCSP53701 268 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 BPIFB3P59826 476 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 GNG3P63215 75 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 EMX1Q04741 257 aaPredicted RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 RELQ04864 619 aaPredicted RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 MFGE8Q08431 387 aaPredicted RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 RIPPLY1Q0D2K3 151 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 IKZF1Q13422 519 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 LSAMPQ13449 338 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ODF4Q2M2E3 257 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ZIK1Q3SY52 487 aaPredicted RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 ANKRD39Q53RE8 183 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 LRRC10Q5BKY1 277 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 METTL11BQ5VVY1 283 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 SIGIRRQ6IA17 410 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 DEGS2Q6QHC5 323 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 PLEKHG7Q6ZR37 379 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ZNF826PQ6ZT77 177 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 MOB3CQ70IA8 216 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ASRGL1Q7L266 308 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 SLC51BQ86UW2 128 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 PDZD9Q8IXQ8 264 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 CMTM4Q8IZR5 234 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 GALNT4Q8N4A0 578 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 CBR4Q8N4T8 237 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 PNLDC1Q8NA58 520 aaKnown RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 SCCPDHQ8NBX0 429 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ZNF555Q8NEP9 628 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms